no code implementations • 13 Mar 2025 • Ye Zhang, Zijie Fang, Yifeng Wang, Lingbo Zhang, Xianchao Guan, Yongbing Zhang
Second, this patch-based approach significantly increases the model's training and inference time.
1 code implementation • 13 Mar 2025 • Fengchun Liu, Linghan Cai, Zhikang Wang, Zhiyuan Fan, Jin-Gang Yu, Hao Chen, Yongbing Zhang
Histo-genomic multimodal survival prediction has garnered growing attention for its remarkable model performance and potential contributions to precision medicine.
1 code implementation • 28 Feb 2025 • Jiuyang Dong, Junjun Jiang, Kui Jiang, Jiahan Li, Yongbing Zhang
Although multi-instance learning (MIL) has succeeded in pathological image classification, it faces the challenge of high inference costs due to processing numerous patches from gigapixel whole slide images (WSIs).
1 code implementation • 30 Dec 2024 • Zijie Fang, Yifeng Wang, Peizhang Xie, Zhi Wang, Yongbing Zhang
In order to further avoid the model overfitting to the occasional synthesis artifacts, we additionally propose a novel self-supervised consistency regularization, which enables the real images without segmentation masks to supervise the training of the segmentation model.
1 code implementation • 19 Dec 2024 • Jinpeng Wang, Niu Lian, Jun Li, Yuting Wang, Yan Feng, Bin Chen, Yongbing Zhang, Shu-Tao Xia
We introduce S5VH, a Mamba-based video hashing model with an improved self-supervised learning paradigm.
1 code implementation • 13 Oct 2024 • Shengxiang Gao, Fang Nan, Yongbing Zhang, Yuxin Huang, Kaiwen Tan, Zhengtao Yu
Existing research on news summarization primarily focuses on single-language single-document (SLSD), single-language multi-document (SLMD) or cross-language single-document (CLSD).
1 code implementation • 25 Jun 2024 • Songhan Jiang, Zhengyu Gan, Linghan Cai, Yifeng Wang, Yongbing Zhang
With the joint representation of pathological images and genomic data, we further introduce a Transport-Guided Attention (TGA) module that uses optimal transport theory to model the correlation between subtype classification and survival analysis tasks, effectively transferring potential information.
no code implementations • 24 Jun 2024 • Ziyue Wang, Ye Zhang, Yifeng Wang, Linghan Cai, Yongbing Zhang
Deep learning has achieved impressive results in nuclei segmentation, but the massive requirement for pixel-wise labels remains a significant challenge.
no code implementations • 26 May 2024 • Runyi Li, Xuanyu Zhang, Zhipei Xu, Yongbing Zhang, Jian Zhang
With the advent of personalized generation models, users can more readily create images resembling existing content, heightening the risk of violating portrait rights and intellectual property (IP).
1 code implementation • 24 May 2024 • Xuanyu Zhang, Jiarui Meng, Runyi Li, Zhipei Xu, Yongbing Zhang, Jian Zhang
Therefore, ensuring the security and fidelity of the original 3D scene while embedding information into the 3DGS point cloud files is an extremely challenging task.
no code implementations • 23 Apr 2024 • Ye Zhang, Yifeng Wang, Zijie Fang, Hao Bian, Linghan Cai, Ziyue Wang, Yongbing Zhang
However, the current weakly supervised nuclei segmentation approaches typically follow a two-stage pseudo-label generation and network training process.
no code implementations • 27 Mar 2024 • Jinpeng Lu, Jingyun Chen, Linghan Cai, Songhan Jiang, Yongbing Zhang
However, modality-specific encoders used in these methods operate independently, inadequately leveraging the synergistic relationships inherent in PET and CT modalities, for example, the complementarity between semantics and structure.
1 code implementation • 8 Mar 2024 • Zijie Fang, Yifeng Wang, Ye Zhang, Zhi Wang, Jian Zhang, Xiangyang Ji, Yongbing Zhang
To tackle this challenge, we propose a framework named MamMIL for WSI analysis by cooperating the selective structured state space model (i. e., Mamba) with MIL, enabling the modeling of global instance dependencies while maintaining linear complexity.
1 code implementation • 7 Feb 2024 • Ye Zhang, Ziyue Wang, Yifeng Wang, Hao Bian, Linghan Cai, Hengrui Li, Lingbo Zhang, Yongbing Zhang
The model has two key designs: a low-resolution denoising (LRD) module and a cross-RoI contrastive learning (CRC) module.
1 code implementation • 18 Jan 2024 • Ye Zhang, Linghan Cai, Ziyue Wang, Yongbing Zhang
Concretely, SEINE introduces a contour-based structure encoding (SE) that considers the correlation between nuclei structure and semantics, realizing a reasonable representation of the nuclei structure.
no code implementations • CVPR 2024 • Jiahan Li, Jiuyang Dong, Shenjin Huang, Xi Li, Junjun Jiang, Xiaopeng Fan, Yongbing Zhang
Recently virtual staining technology has greatly promoted the advancement of histopathology.
no code implementations • 11 Oct 2023 • Zijie Fang, Yihan Liu, Yifeng Wang, Xiangyang Zhang, Yang Chen, Changjing Cai, Yiyang Lin, Ying Han, Zhi Wang, Shan Zeng, Hong Shen, Jun Tan, Yongbing Zhang
Biomarker detection is an indispensable part in the diagnosis and treatment of low-grade glioma (LGG).
no code implementations • 27 Sep 2023 • Marc Aubreville, Nikolas Stathonikos, Taryn A. Donovan, Robert Klopfleisch, Jonathan Ganz, Jonas Ammeling, Frauke Wilm, Mitko Veta, Samir Jabari, Markus Eckstein, Jonas Annuscheit, Christian Krumnow, Engin Bozaba, Sercan Cayir, Hongyan Gu, Xiang 'Anthony' Chen, Mostafa Jahanifar, Adam Shephard, Satoshi Kondo, Satoshi Kasai, Sujatha Kotte, VG Saipradeep, Maxime W. Lafarge, Viktor H. Koelzer, Ziyue Wang, Yongbing Zhang, Sen yang, Xiyue Wang, Katharina Breininger, Christof A. Bertram
The challenge provided annotated histologic tumor images from six different domains and evaluated the algorithmic approaches for mitotic figure detection provided by nine challenge participants on ten independent domains.
1 code implementation • 11 Sep 2023 • Linghan Cai, Jianhao Huang, Zihang Zhu, Jinpeng Lu, Yongbing Zhang
However, precise tumor segmentation is challenging due to the small size of many tumors and the similarity of high-uptake normal areas to the tumor regions.
1 code implementation • 26 Aug 2023 • Bin Chen, Xuanyu Zhang, Shuai Liu, Yongbing Zhang, Jian Zhang
Compressed sensing (CS) is a promising tool for reducing sampling costs.
1 code implementation • 30 Jun 2023 • Zhuchen Shao, Yang Chen, Hao Bian, Jian Zhang, Guojun Liu, Yongbing Zhang
Many studies adopt random sampling pre-processing strategy and WSI-level aggregation models, which inevitably lose critical prognostic information in the patient-level bag.
1 code implementation • 5 May 2023 • Chuang Zhu, ShengJie Liu, Zekuan Yu, Feng Xu, Arpit Aggarwal, Germán Corredor, Anant Madabhushi, Qixun Qu, Hongwei Fan, Fangda Li, Yueheng Li, Xianchao Guan, Yongbing Zhang, Vivek Kumar Singh, Farhan Akram, Md. Mostafa Kamal Sarker, Zhongyue Shi, Mulan Jin
For invasive breast cancer, immunohistochemical (IHC) techniques are often used to detect the expression level of human epidermal growth factor receptor-2 (HER2) in breast tissue to formulate a precise treatment plan.
no code implementations • 17 Mar 2023 • Xuanyu Zhang, Bin Chen, Wenzhen Zou, Shuai Liu, Yongbing Zhang, Ruiqin Xiong, Jian Zhang
Hyperspectral imaging plays a pivotal role in a wide range of applications, like remote sensing, medicine, and cytology.
1 code implementation • 11 Mar 2023 • Simon Graham, Quoc Dang Vu, Mostafa Jahanifar, Martin Weigert, Uwe Schmidt, Wenhua Zhang, Jun Zhang, Sen yang, Jinxi Xiang, Xiyue Wang, Josef Lorenz Rumberger, Elias Baumann, Peter Hirsch, Lihao Liu, Chenyang Hong, Angelica I. Aviles-Rivero, Ayushi Jain, Heeyoung Ahn, Yiyu Hong, Hussam Azzuni, Min Xu, Mohammad Yaqub, Marie-Claire Blache, Benoît Piégu, Bertrand Vernay, Tim Scherr, Moritz Böhland, Katharina Löffler, Jiachen Li, Weiqin Ying, Chixin Wang, Dagmar Kainmueller, Carola-Bibiane Schönlieb, Shuolin Liu, Dhairya Talsania, Yughender Meda, Prakash Mishra, Muhammad Ridzuan, Oliver Neumann, Marcel P. Schilling, Markus Reischl, Ralf Mikut, Banban Huang, Hsiang-Chin Chien, Ching-Ping Wang, Chia-Yen Lee, Hong-Kun Lin, Zaiyi Liu, Xipeng Pan, Chu Han, Jijun Cheng, Muhammad Dawood, Srijay Deshpande, Raja Muhammad Saad Bashir, Adam Shephard, Pedro Costa, João D. Nunes, Aurélio Campilho, Jaime S. Cardoso, Hrishikesh P S, Densen Puthussery, Devika R G, Jiji C V, Ye Zhang, Zijie Fang, Zhifan Lin, Yongbing Zhang, Chunhui Lin, Liukun Zhang, Lijian Mao, Min Wu, Vi Thi-Tuong Vo, Soo-Hyung Kim, Taebum Lee, Satoshi Kondo, Satoshi Kasai, Pranay Dumbhare, Vedant Phuse, Yash Dubey, Ankush Jamthikar, Trinh Thi Le Vuong, Jin Tae Kwak, Dorsa Ziaei, Hyun Jung, Tianyi Miao, David Snead, Shan E Ahmed Raza, Fayyaz Minhas, Nasir M. Rajpoot
Nuclear detection, segmentation and morphometric profiling are essential in helping us further understand the relationship between histology and patient outcome.
no code implementations • 11 Mar 2023 • Zhuchen Shao, Liuxi Dai, Yifeng Wang, Haoqian Wang, Yongbing Zhang
Moreover, we highlight AugDiff's higher-quality augmented feature over image augmentation and its superiority over self-supervised learning.
no code implementations • ICCV 2023 • Zhuchen Shao, Yifeng Wang, Yang Chen, Hao Bian, Shaohui Liu, Haoqian Wang, Yongbing Zhang
Gigapixel Whole Slide Images (WSIs) aided patient diagnosis and prognosis analysis are promising directions in computational pathology.
3 code implementations • 24 Nov 2022 • Zheng Chen, Yulun Zhang, Jinjin Gu, Yongbing Zhang, Linghe Kong, Xin Yuan
The core of our CAT is the Rectangle-Window Self-Attention (Rwin-SA), which utilizes horizontal and vertical rectangle window attention in different heads parallelly to expand the attention area and aggregate the features cross different windows.
1 code implementation • 4 Oct 2022 • Jiale Zhang, Yulun Zhang, Jinjin Gu, Yongbing Zhang, Linghe Kong, Xin Yuan
This is considered as a dense attention strategy since the interactions of tokens are restrained in dense regions.
no code implementations • 31 Jul 2022 • Muhammad Hassan, Haifei Guan, Aikaterini Melliou, Yuqi Wang, Qianhui Sun, Sen Zeng, Wen Liang, Yiwei Zhang, Ziheng Zhang, Qiuyue Hu, Yang Liu, Shunkai Shi, Lin An, Shuyue Ma, Ijaz Gul, Muhammad Akmal Rahee, Zhou You, Canyang Zhang, Vijay Kumar Pandey, Yuxing Han, Yongbing Zhang, Ming Xu, Qiming Huang, Jiefu Tan, Qi Xing, Peiwu Qin, Dongmei Yu
Neural networks have been rapidly expanding in recent years, with novel strategies and applications.
1 code implementation • 26 Jun 2022 • Hao Bian, Zhuchen Shao, Yang Chen, Yifeng Wang, Haoqian Wang, Jian Zhang, Yongbing Zhang
We achieve the state-of-the-art performance on the SICAPv2 dataset, and the visual analysis shows the accurate prediction results of instance level.
no code implementations • 6 May 2022 • Ruitao Zhang, Xueying Han, Ijaz Gul, Shiyao Zhai, Ying Liu, Yongbing Zhang, Yuhan Dong, Lan Ma, Dongmei Yu, Jin Zhou, Peiwu Qin
Although testing on the CAR-T cells dataset, a decent performance is observed, which is attributed to the limited size of the dataset.
no code implementations • 6 May 2022 • Yang Liu, Ersi Zhang, Lulu Xu, Chufan Xiao, Xiaoyun Zhong, Lijin Lian, Fang Li, Bin Jiang, Yuhan Dong, Lan Ma, Qiming Huang, Ming Xu, Yongbing Zhang, Dongmei Yu, Chenggang Yan, Peiwu Qin
Deep learning techniques have shown great potential in medical image processing, particularly through accurate and reliable image segmentation on magnetic resonance imaging (MRI) scans or computed tomography (CT) scans, which allow the localization and diagnosis of lesions.
1 code implementation • 24 Apr 2022 • Jingfen Xie, Jian Zhang, Yongbing Zhang, Xiangyang Ji
Compressed Sensing MRI (CS-MRI) aims at reconstructing de-aliased images from sub-Nyquist sampling k-space data to accelerate MR Imaging, thus presenting two basic issues, i. e., where to sample and how to reconstruct.
no code implementations • 13 Apr 2022 • Chu Han, Xipeng Pan, Lixu Yan, Huan Lin, Bingbing Li, Su Yao, Shanshan Lv, Zhenwei Shi, Jinhai Mai, Jiatai Lin, Bingchao Zhao, Zeyan Xu, Zhizhen Wang, Yumeng Wang, Yuan Zhang, Huihui Wang, Chao Zhu, Chunhui Lin, Lijian Mao, Min Wu, Luwen Duan, Jingsong Zhu, Dong Hu, Zijie Fang, Yang Chen, Yongbing Zhang, Yi Li, Yiwen Zou, Yiduo Yu, Xiaomeng Li, Haiming Li, Yanfen Cui, Guoqiang Han, Yan Xu, Jun Xu, Huihua Yang, Chunming Li, Zhenbing Liu, Cheng Lu, Xin Chen, Changhong Liang, Qingling Zhang, Zaiyi Liu
According to the technical reports of the top-tier teams, CAM is still the most popular approach in WSSS.
Data Augmentation
Weakly supervised Semantic Segmentation
+1
1 code implementation • CVPR 2022 • Xuanyu Zhang, Yongbing Zhang, Ruiqin Xiong, Qilin Sun, Jian Zhang
Hyperspectral imaging is an essential imaging modality for a wide range of applications, especially in remote sensing, agriculture, and medicine.
3 code implementations • NeurIPS 2021 • Zhuchen Shao, Hao Bian, Yang Chen, Yifeng Wang, Jian Zhang, Xiangyang Ji, Yongbing Zhang
Multiple instance learning (MIL) is a powerful tool to solve the weakly supervised classification in whole slide image (WSI) based pathology diagnosis.
Ranked #6 on
Multiple Instance Learning
on TCGA
no code implementations • 28 Dec 2020 • Haibin Xie, Minquan Cheng, Yongbing Zhang
In order to keep the average freshness as large as possible in the cache updating system, we formulate an average freshness-optimal cache updating problem (AFOCUP) to obtain an optimal cache scheme.
Information Theory Information Theory
no code implementations • 9 Aug 2020 • Chenggang Yan, Zhisheng Li, Yongbing Zhang, Yutao Liu, Xiangyang Ji, Yongdong Zhang
The depth images denoising are increasingly becoming the hot research topic nowadays because they reflect the three-dimensional (3D) scene and can be applied in various fields of computer vision.
1 code implementation • 22 Feb 2020 • Jiangpeng Yan, Shuo Chen, Yongbing Zhang, Xiu Li
Our proposed method can reach a better trade-off between computation cost and reconstruction performance for MR reconstruction problem with good generalizability and offer insights to design neural networks for other medical image applications.
no code implementations • 19 Sep 2019 • Yongbing Zhang, Yangzhe Liu, Xiu Li, Shaowei Jiang, Krishna Dixit, Xinfeng Zhang, Xiangyang Ji
Since the optimal parameters of the PgNN can be derived by minimizing the difference between the model-generated images and real captured angle-varied images corresponding to the same scene, the proposed PgNN can get rid of the problem of massive training data as in traditional supervised methods.
no code implementations • 16 Apr 2019 • Minghao Yin, Xiu Li, Yongbing Zhang, Shiqi Wang
In this paper, we aim to understand Residual Network (ResNet) in a scientifically sound way by providing a bridge between ResNet and Feynman path integral.
1 code implementation • 3 Sep 2018 • Yuan Yuan, Siyuan Liu, Jiawei Zhang, Yongbing Zhang, Chao Dong, Liang Lin
We consider the single image super-resolution problem in a more general case that the low-/high-resolution pairs and the down-sampling process are unavailable.