no code implementations • 28 Jun 2017 • Jianpeng Zhang, Yong Xia, Qi Wu, Yutong Xie
The Classification of medical images and illustrations in the literature aims to label a medical image according to the modality it was produced or label an illustration according to its production attributes.
no code implementations • 23 Jul 2018 • Yutong Xie, Jianpeng Zhang, Yong Xia
A multi-level deep ensemble (MLDE) model that can be trained in an 'end to end' manner is proposed for skin lesion classification in dermoscopy images.
no code implementations • 29 Jan 2019 • Yutong Xie, Haiyang Wang, Yan Hao, Zihao Xu
In this paper, we propose a data-driven visual rhythm prediction method, which overcomes the previous works' deficiency that predictions are made primarily by human-crafted hard rules.
1 code implementation • 8 Mar 2019 • Yutong Xie, Jianpeng Zhang, Yong Xia, Chunhua Shen
Our results suggest that it is possible to boost the performance of skin lesion segmentation and classification simultaneously via training a unified model to perform both tasks in a mutual bootstrapping way.
1 code implementation • 27 Mar 2020 • Jianpeng Zhang, Yutong Xie, Guansong Pang, Zhibin Liao, Johan Verjans, Wenxin Li, Zongji Sun, Jian He, Yi Li, Chunhua Shen, Yong Xia
In this paper, we formulate the task of differentiating viral pneumonia from non-viral pneumonia and healthy controls into an one-class classification-based anomaly detection problem, and thus propose the confidence-aware anomaly detection (CAAD) model, which consists of a shared feature extractor, an anomaly detection module, and a confidence prediction module.
no code implementations • 6 Aug 2020 • Yutong Xie, Jianpeng Zhang, Zhibin Liao, Chunhua Shen, Johan Verjans, Yong Xia
In this paper, we propose the pairwise relation-based semi-supervised (PRS^2) model for gland segmentation on histology images.
1 code implementation • CVPR 2021 • Jianpeng Zhang, Yutong Xie, Yong Xia, Chunhua Shen
To address this, we propose a dynamic on-demand network (DoDNet) that learns to segment multiple organs and tumors on partially labeled datasets.
no code implementations • 25 Nov 2020 • Yutong Xie, Jianpeng Zhang, Zehui Liao, Yong Xia, Chunhua Shen
In this paper, we propose a PriorGuided Local (PGL) self-supervised model that learns the region-wise local consistency in the latent feature space.
1 code implementation • 28 Nov 2020 • Jianpeng Zhang, Yutong Xie, Yan Wang, Yong Xia
In this paper, we propose the 3D context residual network (ConResNet) for the accurate segmentation of 3D medical images.
no code implementations • 8 Dec 2020 • Yutong Xie, Gaoxiang Chen, Quanzheng Li
Inspired by the proof of this upper bound and theframework of matrix computation in Hinz & Van de Geer (2019), we propose ageneral computational approach to compute a tight upper bound of regions numberfor theoretically any network structures (e. g. DNN with all kind of skip connec-tions and residual structures).
no code implementations • 1 Jan 2021 • Yutong Xie, Gaoxiang Chen, Quanzheng Li
Inspired by the proof of this upper bound and the framework of matrix computation in \citet{hinz2019framework}, we propose a general computational approach to compute a tight upper bound of regions number for theoretically any network structures (e. g. DNN with all kind of skip connections and residual structures).
1 code implementation • 4 Mar 2021 • Yutong Xie, Jianpeng Zhang, Chunhua Shen, Yong Xia
Convolutional neural networks (CNNs) have been the de facto standard for nowadays 3D medical image segmentation.
1 code implementation • ICLR 2021 • Yutong Xie, Chence Shi, Hao Zhou, Yuwei Yang, Weinan Zhang, Yong Yu, Lei LI
Searching for novel molecules with desired chemical properties is crucial in drug discovery.
1 code implementation • 23 Apr 2021 • Zehui Liao, Yutong Xie, Shishuai Hu, Yong Xia
According to the consistency and reliability of their annotations, we divide nodules into three sets: a consistent and reliable set (CR-Set), an inconsistent set (IC-Set), and a low reliable set (LR-Set).
1 code implementation • 26 Nov 2021 • Zehui Liao, Shishuai Hu, Yutong Xie, Yong Xia
Manual annotation of medical images is highly subjective, leading to inevitable and huge annotation biases.
1 code implementation • 17 Dec 2021 • Yutong Xie, Jianpeng Zhang, Yong Xia, Qi Wu
In this paper, we advocate bringing a wealth of 2D images like chest X-rays as compensation for the lack of 3D data, aiming to build a universal medical self-supervised representation learning framework, called UniMiSS.
no code implementations • 22 Dec 2021 • Yutong Xie, Ziqiao Xu, Jiaqi Ma, Qiaozhu Mei
We further evaluate how well the existing databases and generation models cover the chemical space in terms of #Circles.
1 code implementation • 8 Feb 2022 • Yutong Xie, Dufan Wu, Bin Dong, Quanzheng Li
We proved that a trained model in supervised deep learning minimizes the conditional risk for each input (Theorem 2. 1).
1 code implementation • 25 Feb 2022 • Ting Long, Yutong Xie, Xianyu Chen, Weinan Zhang, Qinxiang Cao, Yong Yu
We thoroughly evaluate our proposed MVG approach in the context of algorithm detection, an important and challenging subfield of PLP.
1 code implementation • 5 Mar 2022 • Yutong Xie, Quanzheng Li
We propose a novel and unified method, measurement-conditioned denoising diffusion probabilistic model (MC-DDPM), for under-sampled medical image reconstruction based on DDPM.
1 code implementation • 17 May 2022 • Hexin Dong, ZiFan Chen, Mingze Yuan, Yutong Xie, Jie Zhao, Fei Yu, Bin Dong, Li Zhang
Therefore, we propose a method called region-aware metric learning (RAML), which first separates the regions of the images and generates region-aware features for further metric learning.
no code implementations • 28 Aug 2022 • Yutong Xie, Jianpeng Zhang, Yong Xia, Anton Van Den Hengel, Qi Wu
Besides, we further extend the clustering-guided attention from single-scale to multi-scale, which is conducive to dense prediction tasks.
1 code implementation • 13 Nov 2022 • Yutong Xie, Jianpeng Zhang, Yong Xia, Chunhua Shen
To address this, we propose a Transformer based dynamic on-demand network (TransDoDNet) that learns to segment organs and tumors on multiple partially labeled datasets.
no code implementations • 16 Dec 2022 • Zehui Liao, Shishuai Hu, Yutong Xie, Yong Xia
Specifically, we estimate the noisy posterior under the supervision of noisy labels, and approximate the batch-level noise transition matrix by estimating the inter-class correlation matrix with neither anchor points nor pseudo anchor points.
no code implementations • CVPR 2023 • Qingjie Zeng, Yutong Xie, Zilin Lu, Yong Xia
In this paper, we propose a novel Pseudo-loss Estimation and Feature Adversarial Training semi-supervised framework, termed as PEFAT, to boost the performance of multi-class and multi-label medical image classification from the point of loss distribution modeling and adversarial training.
Image Classification Semi-supervised Medical Image Classification
no code implementations • 5 Feb 2023 • Yutong Xie, Minne Yuan, Bin Dong, Quanzheng Li
In supervised learning for image denoising, usually the paired clean images and noisy images are collected or synthesised to train a denoising model.
1 code implementation • 8 Mar 2023 • Yutong Xie, Zhaoying Pan, Jinge Ma, Luo Jie, Qiaozhu Mei
Despite the plenty of efforts to improve the generative models, there is limited work on understanding the information needs of the users of these systems at scale.
1 code implementation • 7 Apr 2023 • Yiwen Ye, Yutong Xie, Jianpeng Zhang, Ziyang Chen, Yong Xia
Moreover, UniSeg also beats other pre-trained models on two downstream datasets, providing the community with a high-quality pre-trained model for 3D medical image segmentation.
1 code implementation • 26 May 2023 • Qi Chen, Yutong Xie, Biao Wu, Minh-Son To, James Ang, Qi Wu
In this paper, we seek to design a report generation model that is able to generate reasonable reports even given different images of various body parts.
no code implementations • 29 May 2023 • Yutong Xie, Bing Yang, Qingbiao Guan, Jianpeng Zhang, Qi Wu, Yong Xia
This paper systematically reviews the basic principles of attention mechanisms and their applications in medical image segmentation.
no code implementations • 2 Jun 2023 • Zehui Liao, Yutong Xie, Shishuai Hu, Yong Xia
This paper proposes a Transformer-based Annotation Bias-aware (TAB) medical image segmentation model, which tackles the annotator-related bias via modeling annotator preference and stochastic errors.
1 code implementation • 22 Aug 2023 • Biao Wu, Yutong Xie, Zeyu Zhang, Jinchao Ge, Kaspar Yaxley, Suzan Bahadir, Qi Wu, Yifan Liu, Minh-Son To
Intracranial hemorrhage (ICH) is a pathological condition characterized by bleeding inside the skull or brain, which can be attributed to various factors.
1 code implementation • 26 Sep 2023 • Qingjie Zeng, Yutong Xie, Zilin Lu, Mengkang Lu, Yong Xia
Semi-supervised learning (SSL) has been proven beneficial for mitigating the issue of limited labeled data especially on the task of volumetric medical image segmentation.
2 code implementations • 11 Oct 2023 • Jieneng Chen, Jieru Mei, Xianhang Li, Yongyi Lu, Qihang Yu, Qingyue Wei, Xiangde Luo, Yutong Xie, Ehsan Adeli, Yan Wang, Matthew Lungren, Lei Xing, Le Lu, Alan Yuille, Yuyin Zhou
In this paper, we extend the 2D TransUNet architecture to a 3D network by building upon the state-of-the-art nnU-Net architecture, and fully exploring Transformers' potential in both the encoder and decoder design.
no code implementations • 19 Nov 2023 • Qiaozhu Mei, Yutong Xie, Walter Yuan, Matthew O. Jackson
Their behaviors are often distinct from average and modal human behaviors, in which case they tend to behave on the more altruistic and cooperative end of the distribution.
no code implementations • 20 Nov 2023 • Qingjie Zeng, Yutong Xie, Zilin Lu, Mengkang Lu, Yicheng Wu, Yong Xia
Therefore, in this paper, we introduce a \textbf{Ver}satile \textbf{Semi}-supervised framework (VerSemi) to point out a new perspective that integrates various tasks into a unified model with a broad label space, to exploit more unlabeled data for semi-supervised medical image segmentation.
1 code implementation • 29 Nov 2023 • Yiwen Ye, Yutong Xie, Jianpeng Zhang, Ziyang Chen, Qi Wu, Yong Xia
In this paper, we reconsider versatile self-supervised learning from the perspective of continual learning and propose MedCoSS, a continuous self-supervised learning approach for multi-modal medical data.
1 code implementation • 12 Mar 2024 • Vu Minh Hieu Phan, Yutong Xie, Yuankai Qi, Lingqiao Liu, Liyang Liu, BoWen Zhang, Zhibin Liao, Qi Wu, Minh-Son To, Johan W. Verjans
Medical vision language pre-training (VLP) has emerged as a frontier of research, enabling zero-shot pathological recognition by comparing the query image with the textual descriptions for each disease.
1 code implementation • 3 Apr 2024 • Townim Faisal Chowdhury, Kewen Liao, Vu Minh Hieu Phan, Minh-Son To, Yutong Xie, Kevin Hung, David Ross, Anton Van Den Hengel, Johan W. Verjans, Zhibin Liao
Deep Neural Networks (DNNs) are widely used for visual classification tasks, but their complex computation process and black-box nature hinder decision transparency and interpretability.
2 code implementations • 7 Apr 2024 • Yutong Xie, Qi Chen, Sinuo Wang, Minh-Son To, Iris Lee, Ee Win Khoo, Kerolos Hendy, Daniel Koh, Yong Xia, Qi Wu
Acknowledging this limitation, our objective is to devise a framework capable of concurrently augmenting medical image and text data.