Search Results for author: Zening Fu

Found 14 papers, 2 papers with code

A deep learning model for data-driven discovery of functional connectivity

1 code implementation7 Dec 2021 Usman Mahmood, Zening Fu, Vince Calhoun, Sergey Plis

Functional connectivity (FC) studies have demonstrated the overarching value of studying the brain and its disorders through the undirected weighted graph of fMRI correlation matrix.

Whole MILC: generalizing learned dynamics across tasks, datasets, and populations

1 code implementation29 Jul 2020 Usman Mahmood, Md Mahfuzur Rahman, Alex Fedorov, Noah Lewis, Zening Fu, Vince D. Calhoun, Sergey M. Plis

In this paper we present a novel self supervised training schema which reinforces whole sequence mutual information local to context (whole MILC).

Feature Importance

Prediction of Progression to Alzheimer's disease with Deep InfoMax

no code implementations24 Apr 2019 Alex Fedorov, R. Devon Hjelm, Anees Abrol, Zening Fu, Yuhui Du, Sergey Plis, Vince D. Calhoun

Arguably, unsupervised learning plays a crucial role in the majority of algorithms for processing brain imaging.

General Classification

Transfer Learning of fMRI Dynamics

no code implementations16 Nov 2019 Usman Mahmood, Md Mahfuzur Rahman, Alex Fedorov, Zening Fu, Sergey Plis

In this paper, we demonstrate a self-supervised pre-training method that enables us to pre-train directly on fMRI dynamics of healthy control subjects and transfer the learning to much smaller datasets of schizophrenia.

Small Data Image Classification Transfer Learning

Multi network InfoMax: A pre-training method involving graph convolutional networks

no code implementations1 Nov 2021 Usman Mahmood, Zening Fu, Vince Calhoun, Sergey Plis

Since almost every DL model is an ensemble of multiple networks, we take our high-level embeddings from two different networks of a model --a convolutional and a graph network--.

Graph Classification

Brain dynamics via Cumulative Auto-Regressive Self-Attention

no code implementations1 Nov 2021 Usman Mahmood, Zening Fu, Vince Calhoun, Sergey Plis

The supervised training of the model as a classifier between patients and controls results in a model that generates directed connectivity graphs and highlights the components of the time-series that are predictive for each subject.

Time Series Time Series Analysis

Attend to connect: end-to-end brain functional connectivity estimation

no code implementations ICLR Workshop GTRL 2021 Usman Mahmood, Zening Fu, Vince Calhoun, Sergey Plis

Functional connectivity (FC) studies have demonstrated the benefits of investigating the brain and its disorders through the undirected weighted graph of fMRI correlation matrix.

Connectivity Estimation

Deep Dynamic Effective Connectivity Estimation from Multivariate Time Series

no code implementations4 Feb 2022 Usman Mahmood, Zening Fu, Vince Calhoun, Sergey Plis

To bridge this gap, we developed dynamic effective connectivity estimation via neural network training (DECENNT), a novel model to learn an interpretable directed and dynamic graph induced by the downstream classification/prediction task.

Connectivity Estimation Link Prediction +2

Prediction of Gender from Longitudinal MRI data via Deep Learning on Adolescent Data Reveals Unique Patterns Associated with Brain Structure and Change over a Two-year Period

no code implementations15 Sep 2022 Yuda Bi, Anees Abrol, Zening Fu, Jiayu Chen, Jingyu Liu, Vince Calhoun

Prior work has demonstrated that deep learning models that take advantage of the data's 3D structure can outperform standard machine learning on several learning tasks.

Gender Prediction

MultiCrossViT: Multimodal Vision Transformer for Schizophrenia Prediction using Structural MRI and Functional Network Connectivity Data

no code implementations12 Nov 2022 Yuda Bi, Anees Abrol, Zening Fu, Vince Calhoun

Vision Transformer (ViT) is a pioneering deep learning framework that can address real-world computer vision issues, such as image classification and object recognition.

Image Classification Multimodal Deep Learning +1

Self-Supervised Mental Disorder Classifiers via Time Reversal

no code implementations29 Nov 2022 Zafar Iqbal, Usman Mahmood, Zening Fu, Sergey Plis

In this paper, we demonstrate that a model trained on the time direction of functional neuro-imaging data could help in any downstream task, for example, classifying diseases from healthy controls in fMRI data.

Multiscale Neuroimaging Features for the Identification of Medication Class and Non-Responders in Mood Disorder Treatment

no code implementations12 Feb 2024 Bradley T. Baker, Mustafa S. Salman, Zening Fu, Armin Iraji, Elizabeth Osuch, Jeremy Bockholt, Vince D. Calhoun

In the clinical treatment of mood disorders, the complex behavioral symptoms presented by patients and variability of patient response to particular medication classes can create difficulties in providing fast and reliable treatment when standard diagnostic and prescription methods are used.

feature selection

An Interpretable Cross-Attentive Multi-modal MRI Fusion Framework for Schizophrenia Diagnosis

no code implementations29 Mar 2024 Ziyu Zhou, Anton Orlichenko, Gang Qu, Zening Fu, Vince D Calhoun, Zhengming Ding, Yu-Ping Wang

Both functional and structural magnetic resonance imaging (fMRI and sMRI) are widely used for the diagnosis of mental disorder.

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