Search Results for author: Zhixiang Ren

Found 11 papers, 6 papers with code

ProtFAD: Introducing function-aware domains as implicit modality towards protein function perception

no code implementations24 May 2024 Mingqing Wang, Zhiwei Nie, Yonghong He, Zhixiang Ren

Protein function prediction is currently achieved by encoding its sequence or structure, where the sequence-to-function transcendence and high-quality structural data scarcity lead to obvious performance bottlenecks.

Contrastive Learning Protein Function Prediction +1

Impact of Domain Knowledge and Multi-Modality on Intelligent Molecular Property Prediction: A Systematic Survey

no code implementations11 Feb 2024 Taojie Kuang, PengFei Liu, Zhixiang Ren

We discover that integrating molecular information significantly improves molecular property prediction (MPP) for both regression and classification tasks.

Drug Discovery Molecular Property Prediction +2

Scientific Language Modeling: A Quantitative Review of Large Language Models in Molecular Science

1 code implementation6 Feb 2024 PengFei Liu, Jun Tao, Zhixiang Ren

Efficient molecular modeling and design are crucial for the discovery and exploration of novel molecules, and the incorporation of deep learning methods has revolutionized this field.

Language Modelling

Compact Binary Systems Waveform Generation with Generative Pre-trained Transformer

no code implementations31 Oct 2023 Ruijun Shi, Yue Zhou, Tianyu Zhao, Zhoujian Cao, Zhixiang Ren

Space-based gravitational wave (GW) detection is one of the most anticipated GW detection projects in the next decade, which promises to detect abundant compact binary systems.

Gravitational Wave Detection

3D-Mol: A Novel Contrastive Learning Framework for Molecular Property Prediction with 3D Information

no code implementations28 Sep 2023 Taojie Kuang, Yiming Ren, Zhixiang Ren

Molecular property prediction, crucial for early drug candidate screening and optimization, has seen advancements with deep learning-based methods.

Contrastive Learning Molecular Property Prediction +2

Dilated convolutional neural network for detecting extreme-mass-ratio inspirals

no code implementations31 Aug 2023 Tianyu Zhao, Yue Zhou, Ruijun Shi, Zhoujian Cao, Zhixiang Ren

The detection of Extreme Mass Ratio Inspirals (EMRIs) is intricate due to their complex waveforms, extended duration, and low signal-to-noise ratio (SNR), making them more challenging to be identified compared to compact binary coalescences.

GIT-Mol: A Multi-modal Large Language Model for Molecular Science with Graph, Image, and Text

1 code implementation14 Aug 2023 PengFei Liu, Yiming Ren, Jun Tao, Zhixiang Ren

Large language models have made significant strides in natural language processing, enabling innovative applications in molecular science by processing textual representations of molecules.

Image Captioning Language Modelling +5

Space-based gravitational wave signal detection and extraction with deep neural network

1 code implementation15 Jul 2022 Tianyu Zhao, Ruoxi Lyu, He Wang, Zhoujian Cao, Zhixiang Ren

Space-based gravitational wave (GW) detectors will be able to observe signals from sources that are otherwise nearly impossible from current ground-based detection.

AIPerf: Automated machine learning as an AI-HPC benchmark

1 code implementation17 Aug 2020 Zhixiang Ren, Yongheng Liu, Tianhui Shi, Lei Xie, Yue Zhou, Jidong Zhai, Youhui Zhang, Yunquan Zhang, WenGuang Chen

The de facto HPC benchmark LINPACK can not reflect AI computing power and I/O performance without representative workload.

AutoML Benchmarking +1

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