Brain Tumor Segmentation

123 papers with code • 9 benchmarks • 4 datasets

Brain Tumor Segmentation is a medical image analysis task that involves the separation of brain tumors from normal brain tissue in magnetic resonance imaging (MRI) scans. The goal of brain tumor segmentation is to produce a binary or multi-class segmentation map that accurately reflects the location and extent of the tumor.

( Image credit: Brain Tumor Segmentation with Deep Neural Networks )

Libraries

Use these libraries to find Brain Tumor Segmentation models and implementations

Most implemented papers

Diffusion Models for Implicit Image Segmentation Ensembles

juliawolleb/diffusion-based-segmentation 6 Dec 2021

By modifying the training and sampling scheme, we show that diffusion models can perform lesion segmentation of medical images.

Efficient Multi-Scale 3D CNN with Fully Connected CRF for Accurate Brain Lesion Segmentation

Kamnitsask/deepmedic 18 Mar 2016

We propose a dual pathway, 11-layers deep, three-dimensional Convolutional Neural Network for the challenging task of brain lesion segmentation.

CNN-based Segmentation of Medical Imaging Data

BRML/CNNbasedMedicalSegmentation 11 Jan 2017

While most of the existing literature on medical image segmentation focuses on soft tissue and the major organs, this work is validated on data both from the central nervous system as well as the bones of the hand.

SegAN: Adversarial Network with Multi-scale $L_1$ Loss for Medical Image Segmentation

YuanXue1993/SegAN 6 Jun 2017

Extensive experimental results demonstrate the effectiveness of the proposed SegAN with multi-scale loss: on BRATS 2013 SegAN gives performance comparable to the state-of-the-art for whole tumor and tumor core segmentation while achieves better precision and sensitivity for Gd-enhance tumor core segmentation; on BRATS 2015 SegAN achieves better performance than the state-of-the-art in both dice score and precision.

Lesion Focused Super-Resolution

GinZhu/RDST 15 Oct 2018

Super-resolution (SR) for image enhancement has great importance in medical image applications.

Models Genesis: Generic Autodidactic Models for 3D Medical Image Analysis

MrGiovanni/ModelsGenesis 19 Aug 2019

More importantly, learning a model from scratch simply in 3D may not necessarily yield performance better than transfer learning from ImageNet in 2D, but our Models Genesis consistently top any 2D approaches including fine-tuning the models pre-trained from ImageNet as well as fine-tuning the 2D versions of our Models Genesis, confirming the importance of 3D anatomical information and significance of our Models Genesis for 3D medical imaging.

3D U-Net Based Brain Tumor Segmentation and Survival Days Prediction

woodywff/brats_2019 15 Sep 2019

Dice coefficients for enhancing tumor, tumor core, and the whole tumor are 0. 737, 0. 807 and 0. 894 respectively on the validation dataset.

Learning Semantics-enriched Representation via Self-discovery, Self-classification, and Self-restoration

JLiangLab/SemanticGenesis 14 Jul 2020

To this end, we train deep models to learn semantically enriched visual representation by self-discovery, self-classification, and self-restoration of the anatomy underneath medical images, resulting in a semantics-enriched, general-purpose, pre-trained 3D model, named Semantic Genesis.

What is the best data augmentation for 3D brain tumor segmentation?

mdciri/augmentation 26 Oct 2020

Training segmentation networks requires large annotated datasets, which in medical imaging can be hard to obtain.

TransBTS: Multimodal Brain Tumor Segmentation Using Transformer

Wenxuan-1119/TransBTS 7 Mar 2021

To capture the local 3D context information, the encoder first utilizes 3D CNN to extract the volumetric spatial feature maps.