8 papers with code • 3 benchmarks • 1 datasets
There is large consent that successful training of deep networks requires many thousand annotated training samples.
Ranked #1 on Medical Image Segmentation on ISBI 2012 EM Segmentation (Warping Error metric)
For the past decade, convolutional networks have been used for 3D reconstruction of neurons from electron microscopic (EM) brain images.
Neuron morphology is recognized as a key determinant of cell type, yet the quantitative profiling of a mammalian neuron’s complete three-dimensional (3-D) morphology remains arduous when the neuron has complex arborization and long projection.
The spatial scale of the 3D reconstruction grows rapidly owing to deep neural networks (DNNs) that enable automated image segmentation.
Automated segmentation of cellular electron microscopy (EM) datasets remains a challenge.
Here, we define dense cellular segmentation as a multiclass semantic segmentation task for modeling cells and large numbers of their organelles, and give an example in human blood platelets.
Ranked #1 on 3D Semantic Segmentation on 3D Platelet EM