Guide to k-mer approaches for genomics across the tree of life

1 code implementation • 1 Apr 2024 • Katharine M. Jenike, Lucía Campos-Domínguez, Marilou Boddé, José Cerca, Christina N. Hodson, Michael C. Schatz, Kamil S. Jaron

The wide array of currently available genomes display a wonderful diversity in size, composition and structure with many more to come thanks to several global biodiversity genomics initiatives starting in recent years.

Diversifying the Genomic Data Science Research Community

no code implementations • 20 Jan 2022 • The Genomic Data Science Community Network, Rosa Alcazar, Maria Alvarez, Rachel Arnold, Mentewab Ayalew, Lyle G. Best, Michael C. Campbell, Kamal Chowdhury, Katherine E. L. Cox, Christina Daulton, Youping Deng, Carla Easter, Karla Fuller, Shazia Tabassum Hakim, Ava M. Hoffman, Natalie Kucher, Andrew Lee, Joslynn Lee, Jeffrey T. Leek, Robert Meller, Loyda B. Méndez, Miguel P. Méndez-González, Stephen Mosher, Michele Nishiguchi, Siddharth Pratap, Tiffany Rolle, Sourav Roy, Rachel Saidi, Michael C. Schatz, Shurjo Sen, James Sniezek, Edu Suarez Martinez, Frederick Tan, Jennifer Vessio, Karriem Watson, Wendy Westbroek, Joseph Wilcox, Xianfa Xie

Over the last 20 years, there has been an explosion of genomic data collected for disease association, functional analyses, and other large-scale discoveries.

Cloud Computing

On the Transcriptomic Signature and General Stress State Associated with Aneuploidy

no code implementations • 28 Jul 2020 • Hung-Ji Tsai, Anjali R. Nelliat, Andrei Kucharavy, Mohammad Ikbal Choudhury, Sean X. Sun, Michael C. Schatz, Rong Li

Whether aneuploid cells with diverse karyotypes have any properties in common has a been a subject of intense interest.

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