Coalescent-based species tree estimation: a stochastic Farris transform

13 Jul 2017Gautam DasarathyElchanan MosselRobert NowakSebastien Roch

The reconstruction of a species phylogeny from genomic data faces two significant hurdles: 1) the trees describing the evolution of each individual gene--i.e., the gene trees--may differ from the species phylogeny and 2) the molecular sequences corresponding to each gene often provide limited information about the gene trees themselves. In this paper we consider an approach to species tree reconstruction that addresses both these hurdles... (read more)

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