Tree-SNE: Hierarchical Clustering and Visualization Using t-SNE

13 Feb 2020Isaac RobinsonEmma Pierce-Hoffman

t-SNE and hierarchical clustering are popular methods of exploratory data analysis, particularly in biology. Building on recent advances in speeding up t-SNE and obtaining finer-grained structure, we combine the two to create tree-SNE, a hierarchical clustering and visualization algorithm based on stacked one-dimensional t-SNE embeddings... (read more)

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