no code implementations • 24 Jun 2015 • Kévin Vervier, Pierre Mahé, Jean-Baptiste Veyrieras, Jean-Philippe Vert
Structured machine learning methods were recently proposed for taking into account the structure embedded in a hierarchy and using it as additional a priori information, and could therefore allow to improve microbial identification systems.
no code implementations • 26 May 2015 • Kévin Vervier, Pierre Mahé, Maud Tournoud, Jean-Baptiste Veyrieras, Jean-Philippe Vert
In this work, we investigate the potential of modern, large-scale machine learning implementations for taxonomic affectation of next-generation sequencing reads based on their k-mers profile.