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Unsupervised Deep Learning for Bayesian Brain MRI Segmentation

25 Apr 2019voxelmorph/voxelmorph

To develop a deep learning-based segmentation model for a new image dataset (e. g., of different contrast), one usually needs to create a new labeled training dataset, which can be prohibitively expensive, or rely on suboptimal ad hoc adaptation or augmentation approaches.

BRAIN IMAGE SEGMENTATION BRAIN SEGMENTATION FEW-SHOT SEMANTIC SEGMENTATION IMAGE REGISTRATION ZERO SHOT SEGMENTATION

Enforcing temporal consistency in Deep Learning segmentation of brain MR images

13 Jun 2019bigmb/Unet-Segmentation-Pytorch-Nest-of-Unets

Proposed CNN based segmentation approaches demonstrate how 2D segmentation using prior slices can provide similar results to 3D segmentation while maintaining good continuity in the 3D dimension and improved speed.

3D MEDICAL IMAGING SEGMENTATION 4D SPATIO TEMPORAL SEMANTIC SEGMENTATION BRAIN IMAGE SEGMENTATION

Few-shot 3D Multi-modal Medical Image Segmentation using Generative Adversarial Learning

29 Oct 2018arnab39/FewShot_GAN-Unet3D

In addition, our work presents a comprehensive analysis of different GAN architectures for semi-supervised segmentation, showing recent techniques like feature matching to yield a higher performance than conventional adversarial training approaches.

3D MEDICAL IMAGING SEGMENTATION BRAIN IMAGE SEGMENTATION BRAIN SEGMENTATION FEW-SHOT SEMANTIC SEGMENTATION SEMI-SUPERVISED SEMANTIC SEGMENTATION

A Contrast-Adaptive Method for Simultaneous Whole-Brain and Lesion Segmentation in Multiple Sclerosis

11 May 2020freesurfer/freesurfer

Here we present a method for the simultaneous segmentation of white matter lesions and normal-appearing neuroanatomical structures from multi-contrast brain MRI scans of multiple sclerosis patients.

3D MEDICAL IMAGING SEGMENTATION BRAIN IMAGE SEGMENTATION BRAIN LESION SEGMENTATION FROM MRI BRAIN SEGMENTATION LESION SEGMENTATION

Non-local U-Net for Biomedical Image Segmentation

10 Dec 2018zhengyang-wang/3D-Unet--Tensorflow

In this work, we propose the non-local U-Nets, which are equipped with flexible global aggregation blocks, for biomedical image segmentation.

BRAIN IMAGE SEGMENTATION SEMANTIC SEGMENTATION

NeuroNet: Fast and Robust Reproduction of Multiple Brain Image Segmentation Pipelines

11 Jun 2018DLTK/models

NeuroNet is a deep convolutional neural network mimicking multiple popular and state-of-the-art brain segmentation tools including FSL, SPM, and MALPEM.

BRAIN IMAGE SEGMENTATION BRAIN SEGMENTATION SEMANTIC SEGMENTATION

FusionNet: A deep fully residual convolutional neural network for image segmentation in connectomics

16 Dec 2016GunhoChoi/FusionNet-Pytorch

Electron microscopic connectomics is an ambitious research direction with the goal of studying comprehensive brain connectivity maps by using high-throughput, nano-scale microscopy.

BRAIN IMAGE SEGMENTATION ELECTRON MICROSCOPY IMAGE CLASSIFICATION SEMANTIC SEGMENTATION

ROAM: Random Layer Mixup for Semi-Supervised Learning in Medical Imaging

20 Mar 2020tbdair/ROAM

Medical image segmentation is one of the major challenges addressed by machine learning methods.

BRAIN IMAGE SEGMENTATION BRAIN SEGMENTATION SEMANTIC SEGMENTATION