1 code implementation • Biosystems 2022 • Tim Prangemeier, Christian Wildner, André O.Françani, Christoph Reich, Heinz Koeppl
We give an overview of the datasets recorded for training, validating and testing the networks, as well as a typical use-case.
1 code implementation • 15 Jun 2021 • Christoph Reich, Tim Prangemeier, Christian Wildner, Heinz Koeppl
Time-lapse fluorescent microscopy (TLFM) combined with predictive mathematical modelling is a powerful tool to study the inherently dynamic processes of life on the single-cell level.
Ranked #1 on TFLM sequence generation on TLFM dataset
no code implementations • 1 Mar 2021 • Christian Wildner, Heinz Koeppl
We construct the variational process as a controlled version of the prior process and approximate the posterior by a set of moment functions.
no code implementations • 8 Jan 2021 • Tim Prangemeier, Christian Wildner, Maleen Hanst, Heinz Koeppl
Quantitatively predictive models of biomolecular circuits are important tools for the design of synthetic biology and molecular communication circuits.
1 code implementation • 16 Nov 2020 • Tim Prangemeier, Christian Wildner, André O. Françani, Christoph Reich, Heinz Koeppl
Cell segmentation is a major bottleneck in extracting quantitative single-cell information from microscopy data.
no code implementations • 14 May 2019 • Christian Wildner, Heinz Koeppl
We propose moment-based variational inference as a flexible framework for approximate smoothing of latent Markov jump processes.