Search Results for author: Christoph Zechner

Found 5 papers, 4 papers with code

A local polynomial moment approximation for compartmentalised biochemical systems

no code implementations15 Jun 2023 Tommaso Bianucci, Christoph Zechner

In this work we propose a systematic method to derive closed moment dynamics for compartmentalised biochemical systems.

Dynamic Information Transfer in Stochastic Biochemical Networks

1 code implementation8 Aug 2022 Anne-Lena Moor, Christoph Zechner

We present an efficient Monte Carlo method as well as an analytical approximation to calculate the path mutual information and show how it can be decomposed into a pair of transfer entropies that capture the causal flow of information between two network components.

Stochastic reaction networks in dynamic compartment populations

1 code implementation3 Feb 2020 Lorenzo Duso, Christoph Zechner

Compartmentalization of biochemical processes underlies all biological systems, from the organelle to the tissue scale.

Moment-based analysis of biochemical feedback circuits in a population of chemically interacting cells

1 code implementation6 May 2019 David T. Gonzales, T-Y Dora Tang, Christoph Zechner

Cells utilize chemical communication to exchange information and coordinate their behavior in noisy environments.

Molecular Networks Quantitative Methods

Path mutual information for a class of biochemical reaction networks

1 code implementation3 Apr 2019 Lorenzo Duso, Christoph Zechner

Living cells encode and transmit information in the temporal dynamics of biochemical components.

Molecular Networks Quantitative Methods

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