no code implementations • 23 Jan 2024 • Chuanbo Liu, Yu Fu, Lu Lin, Elliot L. Elson, Jin Wang
This approach, when combined with the analytical capabilities of a sophisticated deep neural network, enables the accurate estimation of rate constants from observational data in a broad range of biochemical reaction networks.
no code implementations • 29 Jul 2023 • Chuanbo Liu, Jin Wang
In this study, we propose repurposing language models as a machine learning approach to solve master equations.
no code implementations • 28 Feb 2021 • Chuanbo Liu, Jin Wang
The discussion of computational complexity suggested a factor of $M$ (which is the connection number of the network) folds time consuming reduction for random time simulation algorithm as compared to other exact stochastic simulation algorithms, such as the Gillespie algorithm.
no code implementations • 28 Feb 2021 • Chuanbo Liu, Jin Wang
Based on the calculated efficiency, we illustrate a new absolute qPCR analysis method for accurately determining nucleic acid amount.
