Outsourcing Memory Through Niche Construction

1 code implementation • 1 Sep 2022 • Edward D. Lee, Jessica C. Flack, David C. Krakauer

Then, how quickly should the organism change in response to the environment?

Discovering sparse control strategies in C. elegans

1 code implementation • 2 Aug 2021 • Edward D. Lee, Xiaowen Chen, Bryan C. Daniels

Applying the protocol to a minimal model of C. elegans neural activity, we find that collective neural statistics are most sensitive to a few principal perturbative modes.

Convenient Interface to Inverse Ising (ConIII): A Python package for solving maximum entropy models

2 code implementations • 24 Jan 2018 • Edward D. Lee, Bryan C. Daniels

ConIII (pronounced CON-ee) is an open-source Python project providing a simple interface to solving maximum entropy models, with a focus on the Ising model.

Quantitative Methods Statistical Mechanics Computational Physics