1 code implementation • 15 Sep 2023 • Harshith Bachimanchi, Matthew I. M. Pinder, Chloé Robert, Pierre De Wit, Jonathan Havenhand, Alexandra Kinnby, Daniel Midtvedt, Erik Selander, Giovanni Volpe
The implementation of deep learning algorithms has brought new perspectives to plankton ecology.
no code implementations • 2 Jan 2023 • Carlo Manzo, Gorka Muñoz-Gil, Giovanni Volpe, Miguel Angel Garcia-March, Maciej Lewenstein, Ralf Metzler
Preface to the special issue "Characterisation of Physical Processes from Anomalous Diffusion Data" associated with the Anomalous Diffusion Challenge ( https://andi-challenge. org ) and published in Journal of Physics A: Mathematical and Theoretical.
1 code implementation • 13 Oct 2022 • Juan S. Sierra, Jesus Pineda, Daniela Rueda, Alejandro Tello, Angelica M. Prada, Virgilio Galvis, Giovanni Volpe, Maria S. Millan, Lenny A. Romero, Andres G. Marrugo
Specular microscopy assessment of the human corneal endothelium (CE) in Fuchs' dystrophy is challenging due to the presence of dark image regions called guttae.
no code implementations • 28 Feb 2022 • Benjamin Midtvedt, Jesús Pineda, Fredrik Skärberg, Erik Olsén, Harshith Bachimanchi, Emelie Wesén, Elin K. Esbjörner, Erik Selander, Fredrik Höök, Daniel Midtvedt, Giovanni Volpe
Here, we propose a novel deep-learning method, named LodeSTAR (Low-shot deep Symmetric Tracking And Regression), that learns to tracks objects with sub-pixel accuracy from a single unlabeled experimental image.
1 code implementation • 18 Feb 2022 • Harshith Bachimanchi, Benjamin Midtvedt, Daniel Midtvedt, Erik Selander, Giovanni Volpe
The marine microbial food web plays a central role in the global carbon cycle.
1 code implementation • 1 Jul 2021 • Yu-Wei Chang, Laura Natali, Oveis Jamialahmadi, Stefano Romeo, Joana B. Pereira, Giovanni Volpe
Since the data to train the neural networks need to be complete, most studies discard the incomplete datapoints, which reduces the size of the training data, or impute the missing features, which can lead to artefacts.
no code implementations • 23 Nov 2020 • Laura Natali, Saga Helgadottir, Onofrio M. Marago, Giovanni Volpe
Containment of epidemic outbreaks entails great societal and economic costs.
1 code implementation • 16 Oct 2020 • Benjamin Midtvedt, Saga Helgadottir, Aykut Argun, Jesús Pineda, Daniel Midtvedt, Giovanni Volpe
We use it to exemplify how deep learning can be employed for a broad range of applications, from particle localization, tracking and characterization to cell counting and classification.
Image and Video Processing Soft Condensed Matter Optics
1 code implementation • 6 Dec 2018 • Saga Helgadottir, Aykut Argun, Giovanni Volpe
We show that DeepTrack outperforms algorithmic approaches, especially in the presence of noise and under poor illumination conditions.
Soft Condensed Matter Optics
no code implementations • 23 Aug 2018 • Fatemeh Kalantarifard, Parviz Elahi, Ghaith Makey, Onofrio M. Maragò, F. Ömer Ilday, Giovanni Volpe
Standard optical tweezers rely on optical forces that arise when a focused laser beam interacts with a microscopic particle: scattering forces, which push the particle along the beam direction, and gradient forces, which attract it towards the high-intensity focal spot.
Optics