Deep SNP: An End-to-end Deep Neural Network with Attention-based Localization for Break-point Detection in SNP Array Genomic data

1 code implementation • 22 Jun 2018 • Hamid Eghbal-zadeh, Lukas Fischer, Niko Popitsch, Florian Kromp, Sabine Taschner-Mandl, Khaled Koutini, Teresa Gerber, Eva Bozsaky, Peter F. Ambros, Inge M. Ambros, Gerhard Widmer, Bernhard A. Moser

We show, that Deep SNP is capable of successfully predicting the presence or absence of a breakpoint in large genomic windows and outperforms state-of-the-art neural network models.