Search Results for author: Joseph Ramsey

Found 10 papers, 4 papers with code

Fast Scalable and Accurate Discovery of DAGs Using the Best Order Score Search and Grow-Shrink Trees

1 code implementation26 Oct 2023 Bryan Andrews, Joseph Ramsey, Ruben Sanchez-Romero, Jazmin Camchong, Erich Kummerfeld

However, the accuracy and execution time of learning algorithms generally struggle to scale to problems with hundreds of highly connected variables -- for instance, recovering brain networks from fMRI data.

Causal Discovery

Causal-learn: Causal Discovery in Python

1 code implementation31 Jul 2023 Yujia Zheng, Biwei Huang, Wei Chen, Joseph Ramsey, Mingming Gong, Ruichu Cai, Shohei Shimizu, Peter Spirtes, Kun Zhang

Causal discovery aims at revealing causal relations from observational data, which is a fundamental task in science and engineering.

Causal Discovery

Greedy Relaxations of the Sparsest Permutation Algorithm

1 code implementation11 Jun 2022 Wai-Yin Lam, Bryan Andrews, Joseph Ramsey

There has been an increasing interest in methods that exploit permutation reasoning to search for directed acyclic causal models, including the "Ordering Search" of Teyssier and Kohler and GSP of Solus, Wang and Uhler.

Causal discovery for observational sciences using supervised machine learning

1 code implementation25 Feb 2022 Anne Helby Petersen, Joseph Ramsey, Claus Thorn Ekstrøm, Peter Spirtes

We use random subsampling to investigate real data performance on small samples and again find that SLdisco is less sensitive towards sample size and hence seems to better utilize the information available in small datasets.

BIG-bench Machine Learning Causal Discovery +1

FRITL: A Hybrid Method for Causal Discovery in the Presence of Latent Confounders

no code implementations26 Mar 2021 Wei Chen, Kun Zhang, Ruichu Cai, Biwei Huang, Joseph Ramsey, Zhifeng Hao, Clark Glymour

The first step of our method uses the FCI procedure, which allows confounders and is able to produce asymptotically correct results.

Causal Discovery

Causal Discovery from Heterogeneous/Nonstationary Data with Independent Changes

no code implementations5 Mar 2019 Biwei Huang, Kun Zhang, Jiji Zhang, Joseph Ramsey, Ruben Sanchez-Romero, Clark Glymour, Bernhard Schölkopf

In this paper, we develop a framework for causal discovery from such data, called Constraint-based causal Discovery from heterogeneous/NOnstationary Data (CD-NOD), to find causal skeleton and directions and estimate the properties of mechanism changes.

Causal Discovery

Diagnosis of Autism Spectrum Disorder by Causal Influence Strength Learned from Resting-State fMRI Data

no code implementations27 Jan 2019 Biwei Huang, Kun Zhang, Ruben Sanchez-Romero, Joseph Ramsey, Madelyn Glymour, Clark Glymour

A substantial body of researches use Pearson's correlation coefficients, mutual information, or partial correlation to investigate the differences in brain connectivities between ASD and typical controls from functional Magnetic Resonance Imaging (fMRI).

Causal Discovery feature selection

FASK with Interventional Knowledge Recovers Edges from the Sachs Model

no code implementations6 May 2018 Joseph Ramsey, Bryan Andrews

We report a procedure that, in one step from continuous data with minimal preparation, recovers the graph found by Sachs et al. \cite{sachs2005causal}, with only a few edges different.

Causal Discovery in the Presence of Measurement Error: Identifiability Conditions

no code implementations10 Jun 2017 Kun Zhang, Mingming Gong, Joseph Ramsey, Kayhan Batmanghelich, Peter Spirtes, Clark Glymour

This problem has received much attention in multiple fields, but it is not clear to what extent the causal model for the measurement-error-free variables can be identified in the presence of measurement error with unknown variance.

Causal Discovery

Improving Accuracy and Scalability of the PC Algorithm by Maximizing P-value

no code implementations3 Oct 2016 Joseph Ramsey

A number of attempts have been made to improve accuracy and/or scalability of the PC (Peter and Clark) algorithm, some well known (Buhlmann, et al., 2010; Kalisch and Buhlmann, 2007; 2008; Zhang, 2012, to give some examples).

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