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Found 3 papers, 1 papers with code
GeoPhy: Differentiable Phylogenetic Inference via Geometric Gradients of Tree Topologies
Phylogenetic inference, grounded in molecular evolution models, is essential for understanding the evolutionary relationships in biological data.
Beyond similarity assessment: Selecting the optimal model for sequence alignment via the Factorized Asymptotic Bayesian algorithm
Pair Hidden Markov Models (PHMMs) are probabilistic models used for pairwise sequence alignment, a quintessential problem in bioinformatics.
Generalized Centroid Estimators in Bioinformatics
In a number of estimation problems in bioinformatics, accuracy measures of the target problem are usually given, and it is important to design estimators that are suitable to those accuracy measures.
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