1 code implementation • 28 Mar 2024 • Parisa Mollaei, Chakradhar Guntuboina, Danush Sadasivam, Amir Barati Farimani
In this study, we introduce IDP-Bert model, a deep-learning architecture leveraging Transformers and Protein Language Models (PLMs) to map sequences directly to IDPs properties.
1 code implementation • 18 Dec 2023 • Seongwon Kim, Parisa Mollaei, Amir Barati Farimani, Anne Skaja Robinson
Alzheimer's Disease (AD), a neurodegenerative disorder, is reported as one of the most severe health and socioeconomic problems in current public health.
no code implementations • 30 Oct 2023 • Seongwon Kim, Parisa Mollaei, Akshay Antony, Rishikesh Magar, Amir Barati Farimani
In this paper, we developed the GPCR-BERT model for understanding the sequential design of G Protein-Coupled Receptors (GPCRs).
1 code implementation • 28 Aug 2023 • Chakradhar Guntuboina, Adrita Das, Parisa Mollaei, Seongwon Kim, Amir Barati Farimani
In this work, inspired by recent progress in Large Language Models (LLMs), we introduce PeptideBERT, a protein language model for predicting three key properties of peptides (hemolysis, solubility, and non-fouling).