Search Results for author: Peter C. St. John

Found 2 papers, 2 papers with code

Plug & Play Directed Evolution of Proteins with Gradient-based Discrete MCMC

1 code implementation20 Dec 2022 Patrick Emami, Aidan Perreault, Jeffrey Law, David Biagioni, Peter C. St. John

We introduce a sampling framework for evolving proteins in silico that supports mixing and matching a variety of unsupervised models, such as protein language models, and supervised models that predict protein function from sequence.

Protein Language Model

Message-passing neural networks for high-throughput polymer screening

1 code implementation26 Jul 2018 Peter C. St. John, Caleb Phillips, Travis W. Kemper, A. Nolan Wilson, Michael F. Crowley, Mark R. Nimlos, Ross E. Larsen

We show that message-passing neural networks trained with and without 3D structural information for these molecules achieve similar accuracy, comparable to state-of-the-art methods on existing benchmark datasets.

BIG-bench Machine Learning Vocal Bursts Intensity Prediction

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