Search Results for author: Qing Nie

Found 4 papers, 1 papers with code

Theoretical and computational tools to model multistable gene regulatory networks

1 code implementation14 Feb 2023 Federico Bocci, Dongya Jia, Qing Nie, Mohit Kumar Jolly, Jose Onuchic

The last decade has witnessed a surge of theoretical and computational models to describe the dynamics of complex gene regulatory networks, and how these interactions can give rise to multistable and heterogeneous cell populations.

AVIDA: Alternating method for Visualizing and Integrating Data

no code implementations31 May 2022 Kathryn Dover, Zixuan Cang, Anna Ma, Qing Nie, Roman Vershynin

In general applications, other methods can be used for the alignment and dimension reduction modules.

Dimensionality Reduction

Noise control and utility: from regulatory network to spatial patterning

no code implementations19 Jan 2020 Qing Nie, Lingxia Qiao, Yuchi Qiu, Lei Zhang, Wei Zhao

Stochasticity (or noise) at cellular and molecular levels has been observed extensively as a universal feature for living systems.

Confederated Modular Differential Equation APIs for Accelerated Algorithm Development and Benchmarking

no code implementations17 Jul 2018 Christopher Rackauckas, Qing Nie

Performant numerical solving of differential equations is required for large-scale scientific modeling.

Software Engineering Mathematical Software

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