Search Results for author: Xiaowen Feng

Found 4 papers, 2 papers with code

Towards complete representation of bacterial contents in metagenomic samples

no code implementations30 Sep 2022 Xiaowen Feng, Heng Li

Our algorithm generates more circular MAGs and moves a step closer to the complete representation of microbiome communities.

Metagenome assembly of high-fidelity long reads with hifiasm-meta

1 code implementation16 Oct 2021 Xiaowen Feng, Haoyu Cheng, Daniel Portik, Heng Li

Current metagenome assemblers developed for short sequence reads or noisy long readswere not optimized for accurate long reads.

Vocal Bursts Intensity Prediction

Haplotype-resolved de novo assembly with phased assembly graphs

no code implementations3 Aug 2020 Haoyu Cheng, Gregory T Concepcion, Xiaowen Feng, Haowen Zhang, Heng Li

Haplotype-resolved de novo assembly is the ultimate solution to the study of sequence variations in a genome.

Genomics Quantitative Methods

The design and construction of reference pangenome graphs

1 code implementation13 Mar 2020 Heng Li, Xiaowen Feng, Chong Chu

The recent advances in sequencing technologies enables the assembly of individual genomes to the reference quality.

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