…We recommend to use Multi Atlas Segmentation and Morphometric analysis toolkit (MASMAT) for mouse brain MRI along with other mouse brain atlases in this repo.
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Mouse Brain MRI atlas (both in-vivo and ex-vivo) (repository relocated from the original webpage) List of atlases FVB_NCrl: Brain MRI atlas of the wild-type FVB_NCrl mouse strain (used as the background NeAt: Brain MRI atlas of the whld-type C57BL/6J mouse strain. Atlas was created based on the original MRM NeAt mouse brain atlas (template images reoriented and bias-corrected, left/right structure label seperated, and 4th ventricle manual segmentation added). Citation If you use the segmented brain structure, or use the atlas along with the automatic mouse brain MRI segmentation tools, we ask you to kindly cite the following papers: Ma D, Cardoso MJ, Modat Automatic structural parcellation of mouse brain MRI using multi-atlas label fusion. PloS one. 2014 Jan 27;9(1):e86576. http://journals.plos.org/plosone/article?
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…To face these challenges, large-scale samples are essential, but single laboratories cannot obtain sufficiently large datasets to reveal the brain mechanisms underlying ASD. In response, the Autism Brain Imaging Data Exchange (ABIDE) initiative has aggregated functional and structural brain imaging data collected from laboratories around the world to accelerate our understanding Each collection was created through the aggregation of datasets independently collected across more than 24 international brain imaging laboratories and are being made available to investigators throughout
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…study subjects with AD, as well as those who may develop AD and controls with no signs of cognitive impairment.2 Researchers at 63 sites in the US and Canada track the progression of AD in the human brain
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…Data from Brain-Tumor-Progression. The Cancer Imaging Archive. https://doi.org/10.7937/K9/TCIA.2018.15quzvnb