…The goal of the challenge is to segment two key brain structures involved in the follow-up and treatment planning of vestibular schwannoma (VS): the VS and the cochleas.
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…We recommend to use Multi Atlas Segmentation and Morphometric analysis toolkit (MASMAT) for mouse brain MRI along with other mouse brain atlases in this repo.
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Mouse Brain MRI atlas (both in-vivo and ex-vivo) (repository relocated from the original webpage) List of atlases FVB_NCrl: Brain MRI atlas of the wild-type FVB_NCrl mouse strain (used as the background NeAt: Brain MRI atlas of the whld-type C57BL/6J mouse strain. Atlas was created based on the original MRM NeAt mouse brain atlas (template images reoriented and bias-corrected, left/right structure label seperated, and 4th ventricle manual segmentation added). Citation If you use the segmented brain structure, or use the atlas along with the automatic mouse brain MRI segmentation tools, we ask you to kindly cite the following papers: Ma D, Cardoso MJ, Modat Automatic structural parcellation of mouse brain MRI using multi-atlas label fusion. PloS one. 2014 Jan 27;9(1):e86576. http://journals.plos.org/plosone/article?
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