…We recommend to use Multi Atlas Segmentation and Morphometric analysis toolkit (MASMAT) for mouse brain MRI along with other mouse brain atlases in this repo.
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…Atlas was created based on the original MRM NeAt mouse brain atlas (template images reoriented and bias-corrected, left/right structure label seperated, and 4th ventricle manual segmentation added). Citation If you use the segmented brain structure, or use the atlas along with the automatic mouse brain MRI segmentation tools, we ask you to kindly cite the following papers: Ma D, Cardoso MJ, Modat
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