PropertyDAG: Multi-objective Bayesian optimization of partially ordered, mixed-variable properties for biological sequence design

no code implementations • 8 Oct 2022 • Ji Won Park, Samuel Stanton, Saeed Saremi, Andrew Watkins, Henri Dwyer, Vladimir Gligorijevic, Richard Bonneau, Stephen Ra, Kyunghyun Cho

Bayesian optimization offers a sample-efficient framework for navigating the exploration-exploitation trade-off in the vast design space of biological sequences.

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Non-Negative Matrix Factorizations for Multiplex Network Analysis

no code implementations • 1 Dec 2016 • Vladimir Gligorijevic, Yannis Panagakis, Stefanos Zafeiriou

Networks have been a general tool for representing, analyzing, and modeling relational data arising in several domains.

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