no code implementations • 25 Oct 2023 • Christian Harder, Moritz Fuchs, Yuri Tolkach, Anirban Mukhopadhyay
We thoroughly evaluate the impact of the employed generative models on state-of-the-art neural networks in terms of accuracy, convergence speed and ensembling.
no code implementations • 23 Aug 2023 • Okyaz Eminaga, Mahmoud Abbas, Christian Kunder, Yuri Tolkach, Ryan Han, James D. Brooks, Rosalie Nolley, Axel Semjonow, Martin Boegemann, Robert West, Jin Long, Richard Fan, Olaf Bettendorf
Adjusting the decision threshold for the secondary Gleason pattern from 5% to 10% improved the concordance level between pathologists and vPatho for tumor grading on prostatectomy specimens (kappa from 0. 44 to 0. 64).
1 code implementation • 29 Sep 2022 • Nicolas Wagner, Moritz Fuchs, Yuri Tolkach, Anirban Mukhopadhyay
As a solution, we propose BottleGAN, a generative model that can computationally align the staining styles of many laboratories and can be trained in a privacy-preserving manner to foster federated learning in computational pathology.
no code implementations • 21 Oct 2019 • Okyaz Eminaga, Mahmood Abbas, Yuri Tolkach, Rosalie Nolley, Christian Kunder, Axel Semjonow, Martin Boegemann
Histopathology is a reflection of the molecular changes and provides prognostic phenotypes representing the disease progression.
no code implementations • 11 Oct 2019 • Okyaz Eminaga, Yuri Tolkach, Christian Kunder, Mahmood Abbas, Ryan Han, Rosalie Nolley, Axel Semjonow, Martin Boegemann, Sebastian Huss, Andreas Loening, Robert West, Geoffrey Sonn, Richard Fan, Olaf Bettendorf, James Brook, Daniel Rubin
For case usage, these models were applied for the annotation tasks in clinician-oriented pathology reports for prostatectomy specimens.