Brain Segmentation

46 papers with code • 1 benchmarks • 4 datasets


Use these libraries to find Brain Segmentation models and implementations

Most implemented papers

Concurrent Spatial and Channel Squeeze & Excitation in Fully Convolutional Networks

abhi4ssj/squeeze_and_excitation 7 Mar 2018

Fully convolutional neural networks (F-CNNs) have set the state-of-the-art in image segmentation for a plethora of applications.

QuickNAT: A Fully Convolutional Network for Quick and Accurate Segmentation of Neuroanatomy

abhi4ssj/QuickNATv2 12 Jan 2018

We introduce QuickNAT, a fully convolutional, densely connected neural network that segments a \revision{MRI brain scan} in 20 seconds.

MRI Super-Resolution using Multi-Channel Total Variation

brudfors/spm_superres 8 Oct 2018

This paper presents a generative model for super-resolution in routine clinical magnetic resonance images (MRI), of arbitrary orientation and contrast.

VoxResNet: Deep Voxelwise Residual Networks for Volumetric Brain Segmentation

txin96/voxresnet 21 Aug 2016

Recently deep residual learning with residual units for training very deep neural networks advanced the state-of-the-art performance on 2D image recognition tasks, e. g., object detection and segmentation.

3D fully convolutional networks for subcortical segmentation in MRI: A large-scale study

josedolz/LiviaNET 12 Dec 2016

To the best of our knowledge, our work is the first to study subcortical structure segmentation on such large-scale and heterogeneous data.

HyperDense-Net: A hyper-densely connected CNN for multi-modal image segmentation

josedolz/HyperDenseNet 9 Apr 2018

Therefore, the proposed network has total freedom to learn more complex combinations between the modalities, within and in-between all the levels of abstraction, which increases significantly the learning representation.

Association of genomic subtypes of lower-grade gliomas with shape features automatically extracted by a deep learning algorithm

mateuszbuda/brain-segmentation 9 Jun 2019

Based on automatic deep learning segmentations, we extracted three features which quantify two-dimensional and three-dimensional characteristics of the tumors.

A Learning Strategy for Contrast-agnostic MRI Segmentation

BBillot/SynthSeg MIDL 2019

These samples are produced using the generative model of the classical Bayesian segmentation framework, with randomly sampled parameters for appearance, deformation, noise, and bias field.

Deep Neural Networks for Anatomical Brain Segmentation

ashishpatel26/BrainMRI-Segmentation-Keras 9 Feb 2015

To our knowledge, our technique is the first to tackle the anatomical segmentation of the whole brain using deep neural networks.

Spatially Localized Atlas Network Tiles Enables 3D Whole Brain Segmentation from Limited Data

MASILab/SLANTbrainSeg 1 Jun 2018

Whole brain segmentation on a structural magnetic resonance imaging (MRI) is essential in non-invasive investigation for neuroanatomy.