Brain Tumor Segmentation
Brain tumor segmentation is the task of segmenting tumors from other brain artefacts in MRI image of the brain.
( Image credit: Brain Tumor Segmentation with Deep Neural Networks )
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Greatest papers with code
Efficient Multi-Scale 3D CNN with Fully Connected CRF for Accurate Brain Lesion Segmentation
We propose a dual pathway, 11-layers deep, three-dimensional Convolutional Neural Network for the challenging task of brain lesion segmentation.
SOTA for Lesion Segmentation on ISLES-2015
3D MEDICAL IMAGING SEGMENTATION BRAIN LESION SEGMENTATION FROM MRI BRAIN TUMOR SEGMENTATION LESION SEGMENTATION
Brain Tumor Segmentation with Deep Neural Networks
Finally, we explore a cascade architecture in which the output of a basic CNN is treated as an additional source of information for a subsequent CNN.
Automatic Brain Tumor Segmentation using Cascaded Anisotropic Convolutional Neural Networks
• taigw/brats17
• 
A cascade of fully convolutional neural networks is proposed to segment multi-modal Magnetic Resonance (MR) images with brain tumor into background and three hierarchical regions: whole tumor, tumor core and enhancing tumor core.
Models Genesis: Generic Autodidactic Models for 3D Medical Image Analysis
More importantly, learning a model from scratch simply in 3D may not necessarily yield performance better than transfer learning from ImageNet in 2D, but our Models Genesis consistently top any 2D approaches including fine-tuning the models pre-trained from ImageNet as well as fine-tuning the 2D versions of our Models Genesis, confirming the importance of 3D anatomical information and significance of our Models Genesis for 3D medical imaging.
BRAIN TUMOR SEGMENTATION LIVER SEGMENTATION LUNG NODULE DETECTION LUNG NODULE SEGMENTATION PULMONARY EMBOLISM DETECTION TRANSFER LEARNING
Association of genomic subtypes of lower-grade gliomas with shape features automatically extracted by a deep learning algorithm
• mateuszbuda/brain-segmentation-pytorch
• 
Based on automatic deep learning segmentations, we extracted three features which quantify two-dimensional and three-dimensional characteristics of the tumors.
3D MEDICAL IMAGING SEGMENTATION BRAIN SEGMENTATION BRAIN TUMOR SEGMENTATION
Autofocus Layer for Semantic Segmentation
We propose the autofocus convolutional layer for semantic segmentation with the objective of enhancing the capabilities of neural networks for multi-scale processing.
#2 best model for
Brain Tumor Segmentation
on BRATS-2015
3D MRI brain tumor segmentation using autoencoder regularization
Automated segmentation of brain tumors from 3D magnetic resonance images (MRIs) is necessary for the diagnosis, monitoring, and treatment planning of the disease.
SegAN: Adversarial Network with Multi-scale $L_1$ Loss for Medical Image Segmentation
Extensive experimental results demonstrate the effectiveness of the proposed SegAN with multi-scale loss: on BRATS 2013 SegAN gives performance comparable to the state-of-the-art for whole tumor and tumor core segmentation while achieves better precision and sensitivity for Gd-enhance tumor core segmentation; on BRATS 2015 SegAN achieves better performance than the state-of-the-art in both dice score and precision.
Brain Tumor Segmentation and Radiomics Survival Prediction: Contribution to the BRATS 2017 Challenge
• pykao/Modified-3D-UNet-Pytorch
•
Quantitative analysis of brain tumors is critical for clinical decision making.
3D Dilated Multi-Fiber Network for Real-time Brain Tumor Segmentation in MRI
• China-LiuXiaopeng/BraTS-DMFNet
•
In this work, we aim to segment brain MRI volumes.