Brain tumor segmentation is the task of segmenting tumors from other brain artefacts in MRI image of the brain.
( Image credit: Brain Tumor Segmentation with Deep Neural Networks )
We apply nnU-Net to the segmentation task of the BraTS 2020 challenge.
BRAIN TUMOR SEGMENTATION DATA AUGMENTATION TUMOR SEGMENTATION
We propose a dual pathway, 11-layers deep, three-dimensional Convolutional Neural Network for the challenging task of brain lesion segmentation.
Ranked #1 on
Lesion Segmentation
on ISLES-2015
3D MEDICAL IMAGING SEGMENTATION BRAIN LESION SEGMENTATION FROM MRI BRAIN TUMOR SEGMENTATION LESION SEGMENTATION
Automated segmentation of brain tumors from 3D magnetic resonance images (MRIs) is necessary for the diagnosis, monitoring, and treatment planning of the disease.
Ranked #1 on
Brain Tumor Segmentation
on BRATS 2018
More importantly, learning a model from scratch simply in 3D may not necessarily yield performance better than transfer learning from ImageNet in 2D, but our Models Genesis consistently top any 2D approaches including fine-tuning the models pre-trained from ImageNet as well as fine-tuning the 2D versions of our Models Genesis, confirming the importance of 3D anatomical information and significance of our Models Genesis for 3D medical imaging.
Ranked #1 on
Lung Nodule Segmentation
on LIDC-IDRI
BRAIN TUMOR SEGMENTATION LIVER SEGMENTATION LUNG NODULE DETECTION LUNG NODULE SEGMENTATION PULMONARY EMBOLISM DETECTION SELF-SUPERVISED LEARNING TRANSFER LEARNING
Based on automatic deep learning segmentations, we extracted three features which quantify two-dimensional and three-dimensional characteristics of the tumors.
Ranked #2 on
Brain Segmentation
on Brain MRI segmentation
3D MEDICAL IMAGING SEGMENTATION BRAIN SEGMENTATION BRAIN TUMOR SEGMENTATION TUMOR SEGMENTATION TWO-SAMPLE TESTING
In this paper we attempt to overcome these limitations with the proposed architecture, by capturing richer contextual dependencies based on the use of guided self-attention mechanisms.
Ranked #1 on
Medical Image Segmentation
on HSVM
ATTENTIVE SEGMENTATION NETWORKS BRAIN TUMOR SEGMENTATION DEEP ATTENTION
Finally, we explore a cascade architecture in which the output of a basic CNN is treated as an additional source of information for a subsequent CNN.
Ranked #1 on
Brain Tumor Segmentation
on BRATS-2013 leaderboard
We propose the autofocus convolutional layer for semantic segmentation with the objective of enhancing the capabilities of neural networks for multi-scale processing.
Ranked #3 on
Brain Tumor Segmentation
on BRATS-2015
Quantitative analysis of brain tumors is critical for clinical decision making.
Ranked #2 on
Brain Tumor Segmentation
on BRATS-2015
BRAIN TUMOR SEGMENTATION DATA AUGMENTATION DECISION MAKING TUMOR SEGMENTATION
To overcome this issue, we propose using an overcomplete convolutional architecture where we project our input image into a higher dimension such that we constrain the receptive field from increasing in the deep layers of the network.
Ranked #1 on
Medical Image Segmentation
on RITE
3D MEDICAL IMAGING SEGMENTATION BRAIN TUMOR SEGMENTATION COMPUTED TOMOGRAPHY (CT) LIVER SEGMENTATION SEMANTIC SEGMENTATION ULTRASOUND VOLUMETRIC MEDICAL IMAGE SEGMENTATION