Search Results for author: Allen Zhang

Found 4 papers, 1 papers with code

Non-Euclidean Spatial Graph Neural Network

1 code implementation17 Dec 2023 Zheng Zhang, Sirui Li, Jingcheng Zhou, Junxiang Wang, Abhinav Angirekula, Allen Zhang, Liang Zhao

Besides, existing spatial network representation learning methods can only consider networks embedded in Euclidean space, and can not well exploit the rich geometric information carried by irregular and non-uniform non-Euclidean space.

Representation Learning

VOLTA: an Environment-Aware Contrastive Cell Representation Learning for Histopathology

no code implementations8 Mar 2023 Ramin Nakhli, Allen Zhang, Hossein Farahani, Amirali Darbandsari, Elahe Shenasa, Sidney Thiessen, Katy Milne, Jessica McAlpine, Brad Nelson, C Blake Gilks, Ali Bashashati

To showcase the potential power of our proposed framework, we applied VOLTA to ovarian and endometrial cancers with very small sample sizes (10-20 samples) and demonstrated that our cell representations can be utilized to identify the known histotypes of ovarian cancer and provide novel insights that link histopathology and molecular subtypes of endometrial cancer.

Representation Learning

CO-PILOT: Dynamic Top-Down Point Cloud with Conditional Neighborhood Aggregation for Multi-Gigapixel Histopathology Image Representation

no code implementations ICCV 2023 Ramin Nakhli, Allen Zhang, Ali Mirabadi, Katherine Rich, Maryam Asadi, Blake Gilks, Hossein Farahani, Ali Bashashati

Importantly, our model is able to stratify the patients into different risk cohorts with statistically different outcomes across two large datasets, a task that was previously achievable only using genomic information.

Multiple Instance Learning Survival Prediction

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