Search Results for author: Benedict Paten

Found 3 papers, 3 papers with code

DP-CGAN: Differentially Private Synthetic Data and Label Generation

1 code implementation27 Jan 2020 Reihaneh Torkzadehmahani, Peter Kairouz, Benedict Paten

Generative Adversarial Networks (GANs) are one of the well-known models to generate synthetic data including images, especially for research communities that cannot use original sensitive datasets because they are not publicly accessible.

Haplotype-aware graph indexes

3 code implementations10 May 2018 Jouni Sirén, Erik Garrison, Adam M. Novak, Benedict Paten, Richard Durbin

The variation graph toolkit (VG) represents genetic variation as a graph.

Data Structures and Algorithms

Phylogenetic automata, pruning, and multiple alignment

2 code implementations22 Mar 2011 Oscar Westesson, Gerton Lunter, Benedict Paten, Ian Holmes

We present an extension of Felsenstein's algorithm to indel models defined on entire sequences, without the need to condition on one multiple alignment.

Multiple Sequence Alignment

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