Search Results for author: Erik Garrison

Found 2 papers, 2 papers with code

Haplotype-aware graph indexes

3 code implementations10 May 2018 Jouni Sirén, Erik Garrison, Adam M. Novak, Benedict Paten, Richard Durbin

The variation graph toolkit (VG) represents genetic variation as a graph.

Data Structures and Algorithms

Haplotype-based variant detection from short-read sequencing

17 code implementations17 Jul 2012 Erik Garrison, Gabor Marth

The direct detection of haplotypes from short-read DNA sequencing data requires changes to existing small-variant detection methods.

Genomics Quantitative Methods

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