Search Results for author: Gökçe Uludoğan

Found 4 papers, 2 papers with code

TURNA: A Turkish Encoder-Decoder Language Model for Enhanced Understanding and Generation

1 code implementation25 Jan 2024 Gökçe Uludoğan, Zeynep Yirmibeşoğlu Balal, Furkan Akkurt, Melikşah Türker, Onur Güngör, Susan Üsküdarlı

In this work, we introduce the language model TURNA, which is developed for the low-resource language Turkish and is capable of both natural language understanding and generation tasks.

Language Modelling Natural Language Understanding

Exploring Data-Driven Chemical SMILES Tokenization Approaches to Identify Key Protein-Ligand Binding Moieties

no code implementations26 Oct 2022 Asu Büşra Temizer, Gökçe Uludoğan, Rıza Özçelik, Taha Koulani, Elif Ozkirimli, Kutlu O. Ulgen, Nilgün Karalı, Arzucan Özgür

To this end, we build a language-inspired pipeline that treats high affinity ligands of protein targets as documents and selects key chemical words making up those ligands based on tf-idf weighting.

Drug Discovery Property Prediction

Exploiting Pretrained Biochemical Language Models for Targeted Drug Design

1 code implementation2 Sep 2022 Gökçe Uludoğan, Elif Ozkirimli, Kutlu O. Ulgen, Nilgün Karalı, Arzucan Özgür

On the other hand, large amounts of unlabeled protein sequences and chemical compounds are available and have been used to train language models that learn useful representations.

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