no code implementations • 10 Apr 2024 • Chloe Herman, Bridget M. Barker, Thais F. Bartelli, Vidhi Chandra, Rosa Krajmalnik-Brown, Mary Jewell, Le Li, Chen Liao, Florencia McAllister, Khemlal Nirmalkar, Joao B. Xavier, J. Gregory Caporaso
Quantifying the extent of engraftment following an FMT is important in determining if a recipient didn't respond because the engrafted microbiome didn't produce the desired outcomes (a successful FMT, but negative treatment outcome), or the microbiome didn't engraft (an unsuccessful FMT and negative treatment outcome).
1 code implementation • 18 May 2023 • Christopher R. Keefe, Matthew R. Dillon, Chloe Herman, Mary Jewell, Colin V. Wood, Evan Bolyen, J. Gregory Caporaso
Study reproducibility is essential to corroborate, build on, and learn from the results of scientific research but is notoriously challenging in bioinformatics, which often involves large data sets and complex analytic workflows involving many different tools.
