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Found 2 papers, 2 papers with code
De novo reconstruction of satellite repeat units from sequence data
Existing algorithms for identifying satellite repeats either require the complete assembly of satellites or only work for simple repeat structures without HORs.
GapPredict: A Language Model for Resolving Gaps in Draft Genome Assemblies
Short-read DNA sequencing instruments can yield over 1e+12 bases per run, typically composed of reads 150 bases long.
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