1 code implementation • 23 Dec 2019 • Qingyu Chen, Kyubum Lee, Shankai Yan, Sun Kim, Chih-Hsuan Wei, Zhiyong Lu
Capturing the semantics of related biological concepts, such as genes and mutations, is of significant importance to many research tasks in computational biology such as protein-protein interaction detection, gene-drug association prediction, and biomedical literature-based discovery.
no code implementations • 23 Sep 2019 • Chih-Hsuan Wei, Kyubum Lee, Robert Leaman, Zhiyong Lu
The priority ordering rule-based approach demonstrated F1-scores of 71. 29% (micro-averaged) and 41. 19% (macro-averaged), while the new disambiguation method demonstrated F1-scores of 91. 94% (micro-averaged) and 85. 42% (macro-averaged), a very substantial increase.