Search Results for author: Kyubum Lee

Found 2 papers, 1 papers with code

BioConceptVec: creating and evaluating literature-based biomedical concept embeddings on a large scale

1 code implementation23 Dec 2019 Qingyu Chen, Kyubum Lee, Shankai Yan, Sun Kim, Chih-Hsuan Wei, Zhiyong Lu

Capturing the semantics of related biological concepts, such as genes and mutations, is of significant importance to many research tasks in computational biology such as protein-protein interaction detection, gene-drug association prediction, and biomedical literature-based discovery.

Biomedical Mention Disambiguation using a Deep Learning Approach

no code implementations23 Sep 2019 Chih-Hsuan Wei, Kyubum Lee, Robert Leaman, Zhiyong Lu

The priority ordering rule-based approach demonstrated F1-scores of 71. 29% (micro-averaged) and 41. 19% (macro-averaged), while the new disambiguation method demonstrated F1-scores of 91. 94% (micro-averaged) and 85. 42% (macro-averaged), a very substantial increase.

named-entity-recognition Named Entity Recognition +1

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