Sequence-to-sequence translation from mass spectra to peptides with a transformer model

2 code implementations • bioRxiv 2023 • Melih Yilmaz, William E. Fondrie, Wout Bittremieux, Rowan Nelson, Varun Ananth, Sewoong Oh, William Stafford Noble

A fundamental challenge for any mass spectrometry-based proteomics experiment is the identification of the peptide that generated each acquired tandem mass spectrum.

de novo peptide sequencing