Linking the Dynamic PicoProbe Analytical Electron-Optical Beam Line / Microscope to Supercomputers

no code implementations • 25 Aug 2023 • Alexander Brace, Rafael Vescovi, Ryan Chard, Nickolaus D. Saint, Arvind Ramanathan, Nestor J. Zaluzec, Ian Foster

The Dynamic PicoProbe at Argonne National Laboratory is undergoing upgrades that will enable it to produce up to 100s of GB of data per day.

Scaling Distributed Training of Flood-Filling Networks on HPC Infrastructure for Brain Mapping

1 code implementation • 13 May 2019 • Wushi Dong, Murat Keceli, Rafael Vescovi, Hanyu Li, Corey Adams, Elise Jennings, Samuel Flender, Tom Uram, Venkatram Vishwanath, Nicola Ferrier, Narayanan Kasthuri, Peter Littlewood

Mapping all the neurons in the brain requires automatic reconstruction of entire cells from volume electron microscopy data.

Playing the Game of 2048

Quantifying mesoscale neuroanatomy using X-ray microtomography

no code implementations • 13 Apr 2016 • Eva L. Dyer, William Gray Roncal, Hugo L. Fernandes, Doga Gürsoy, Vincent De Andrade, Rafael Vescovi, Kamel Fezzaa, Xianghui Xiao, Joshua T. Vogelstein, Chris Jacobsen, Konrad P. Körding, Narayanan Kasthuri

Methods for resolving the 3D microstructure of the brain typically start by thinly slicing and staining the brain, and then imaging each individual section with visible light photons or electrons.