no code implementations • 9 Jan 2021 • Luca Cardelli, Isabel Cristina Perez-Verona, Mirco Tribastone, Max Tschaikowski, Andrea Vandin, Tabea Waizmann
Motivation: Stochastic reaction networks are a widespread model to describe biological systems where the presence of noise is relevant, such as in cell regulatory processes.
no code implementations • 12 Jun 2020 • Tabea Waizmann, Luca Bortolussi, Andrea Vandin, Mirco Tribastone
The deterministic rate equation (DRE) gives a macroscopic approximation as a compact system of differential equations that estimate the average populations for each species, but it may be inaccurate in the case of nonlinear interaction dynamics.
