Search Results for author: Tianshuo Zhou

Found 4 papers, 3 papers with code

Messenger RNA Design via Expected Partition Function and Continuous Optimization

1 code implementation29 Dec 2023 Ning Dai, Wei Yu Tang, Tianshuo Zhou, David H. Mathews, Liang Huang

We then use gradient descent-based optimization methods to improve the extended objective function, and the distribution will gradually shrink towards a one-hot sequence (i. e., a single sequence).

Undesignable RNA Structure Identification via Rival Structure Generation and Structure Decomposition

1 code implementation14 Nov 2023 Tianshuo Zhou, Wei Yu Tang, David H. Mathews, Liang Huang

RNA design is the search for a sequence or set of sequences that will fold into predefined structures, also known as the inverse problem of RNA folding.

MARVEL: Unlocking the Multi-Modal Capability of Dense Retrieval via Visual Module Plugin

1 code implementation21 Oct 2023 Tianshuo Zhou, Sen Mei, Xinze Li, Zhenghao Liu, Chenyan Xiong, Zhiyuan Liu, Yu Gu, Ge Yu

To facilitate the multi-modal retrieval tasks, we build the ClueWeb22-MM dataset based on the ClueWeb22 dataset, which regards anchor texts as queries, and exacts the related text and image documents from anchor-linked web pages.

Language Modelling Retrieval +1

GREASE: A Generative Model for Relevance Search over Knowledge Graphs

no code implementations11 Oct 2019 Tianshuo Zhou, Ziyang Li, Gong Cheng, Jun Wang, Yu'Ang Wei

The model applies to meta-path based relevance where a meta-path characterizes a particular type of semantics of relating the query entity to answer entities.

Knowledge Graphs

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