Search Results for author: Dónal Landers

Found 4 papers, 1 papers with code

Active entailment encoding for explanation tree construction using parsimonious generation of hard negatives

no code implementations2 Aug 2022 Alex Bogatu, Zili Zhou, Dónal Landers, André Freitas

Entailment trees have been proposed to simulate the human reasoning process of explanation generation in the context of open--domain textual question answering.

Explanation Generation Question Answering

A systematic review of biologically-informed deep learning models for cancer: fundamental trends for encoding and interpreting oncology data

no code implementations2 Jul 2022 Magdalena Wysocka, Oskar Wysocki, Marie Zufferey, Dónal Landers, André Freitas

We discuss the recent evolutionary arch of DL models in the direction of integrating prior biological relational and network knowledge to support better generalisation (e. g. pathways or Protein-Protein-Interaction networks) and interpretability.

Transformers and the representation of biomedical background knowledge

no code implementations4 Feb 2022 Oskar Wysocki, Zili Zhou, Paul O'Regan, Deborah Ferreira, Magdalena Wysocka, Dónal Landers, André Freitas

Specialised transformers-based models (such as BioBERT and BioMegatron) are adapted for the biomedical domain based on publicly available biomedical corpora.

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