Search Results for author: Edward Meeds

Found 11 papers, 5 papers with code

AIRIVA: A Deep Generative Model of Adaptive Immune Repertoires

no code implementations26 Apr 2023 Melanie F. Pradier, Niranjani Prasad, Paidamoyo Chapfuwa, Sahra Ghalebikesabi, Max Ilse, Steven Woodhouse, Rebecca Elyanow, Javier Zazo, Javier Gonzalez, Julia Greissl, Edward Meeds

Recent advances in immunomics have shown that T-cell receptor (TCR) signatures can accurately predict active or recent infection by leveraging the high specificity of TCR binding to disease antigens.

Specificity

Capturing Actionable Dynamics with Structured Latent Ordinary Differential Equations

1 code implementation25 Feb 2022 Paidamoyo Chapfuwa, Sherri Rose, Lawrence Carin, Edward Meeds, Ricardo Henao

Understanding the effects of these system inputs on system outputs is crucial to have any meaningful model of a dynamical system.

Time Series Time Series Analysis

Efficient Amortised Bayesian Inference for Hierarchical and Nonlinear Dynamical Systems

1 code implementation28 May 2019 Geoffrey Roeder, Paul K. Grant, Andrew Phillips, Neil Dalchau, Edward Meeds

Our model class is a generalisation of nonlinear mixed-effects (NLME) dynamical systems, the statistical workhorse for many experimental sciences.

Bayesian Inference Zero-Shot Learning

Deterministic Variational Inference for Robust Bayesian Neural Networks

3 code implementations ICLR 2019 Anqi Wu, Sebastian Nowozin, Edward Meeds, Richard E. Turner, José Miguel Hernández-Lobato, Alexander L. Gaunt

We provide two innovations that aim to turn VB into a robust inference tool for Bayesian neural networks: first, we introduce a novel deterministic method to approximate moments in neural networks, eliminating gradient variance; second, we introduce a hierarchical prior for parameters and a novel Empirical Bayes procedure for automatically selecting prior variances.

Variational Inference

Soft Weight-Sharing for Neural Network Compression

3 code implementations13 Feb 2017 Karen Ullrich, Edward Meeds, Max Welling

The success of deep learning in numerous application domains created the de- sire to run and train them on mobile devices.

Neural Network Compression Quantization

Automatic Variational ABC

no code implementations28 Jun 2016 Alexander Moreno, Tameem Adel, Edward Meeds, James M. Rehg, Max Welling

Approximate Bayesian Computation (ABC) is a framework for performing likelihood-free posterior inference for simulation models.

Variational Inference

Hamiltonian ABC

no code implementations6 Mar 2015 Edward Meeds, Robert Leenders, Max Welling

Approximate Bayesian computation (ABC) is a powerful and elegant framework for performing inference in simulation-based models.

Bayesian Inference

POPE: Post Optimization Posterior Evaluation of Likelihood Free Models

no code implementations9 Dec 2014 Edward Meeds, Michael Chiang, Mary Lee, Olivier Cinquin, John Lowengrub, Max Welling

We propose a post optimization posterior analysis that computes and visualizes all the models that can generate equally good or better simulation results, subject to constraints.

MLitB: Machine Learning in the Browser

1 code implementation8 Dec 2014 Edward Meeds, Remco Hendriks, Said Al Faraby, Magiel Bruntink, Max Welling

Beyond an educational resource for ML, the browser has vast potential to not only improve the state-of-the-art in ML research, but also, inexpensively and on a massive scale, to bring sophisticated ML learning and prediction to the public at large.

BIG-bench Machine Learning Distributed Computing +1

GPS-ABC: Gaussian Process Surrogate Approximate Bayesian Computation

no code implementations13 Jan 2014 Edward Meeds, Max Welling

Scientists often express their understanding of the world through a computationally demanding simulation program.

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