1 code implementation • 20 Oct 2022 • Karina Ruzaeva, Jan-Christopher Cohrs, Keitaro Kasahara, Dietrich Kohlheyer, Katharina Nöh, Benjamin Berkels
Cell tracking is an essential tool in live-cell imaging to determine single-cell features, such as division patterns or elongation rates.
no code implementations • 30 Sep 2022 • Karina Ruzaeva, Kira Küsters, Wolfgang Wiechert, Benjamin Berkels, Marco Oldiges, Katharina Nöh
To explore heterogeneity of CatIB development during the cultivation and track the size and quantity of CatIBs over time, a hybrid image processing pipeline approach was developed, which combines an ML-based detection of in-focus cells with model-based segmentation.
no code implementations • 3 May 2022 • Karina Ruzaeva, Katharina Nöh, Benjamin Berkels
Still, the proposed method performs on par with ML-based segmentation approaches usually used in this context.