no code implementations • 27 Mar 2024 • Tian Yu, Yunhe Li, Michael E. Kim, Chenyu Gao, Qi Yang, Leon Y. Cai, Susane M. Resnick, Lori L. Beason-Held, Daniel C. Moyer, Kurt G. Schilling, Bennett A. Landman
Diffusion MRI (dMRI) streamline tractography, the gold standard for in vivo estimation of brain white matter (WM) pathways, has long been considered indicative of macroscopic relationships with WM microstructure.
no code implementations • 9 Jan 2024 • Hanliang Xu, Nancy R. Newlin, Michael E. Kim, Chenyu Gao, Praitayini Kanakaraj, Aravind R. Krishnan, Lucas W. Remedios, Nazirah Mohd Khairi, Kimberly Pechman, Derek Archer, Timothy J. Hohman, Angela L. Jefferson, The BIOCARD Study Team, Ivana Isgum, Yuankai Huo, Daniel Moyer, Kurt G. Schilling, Bennett A. Landman
First, we plotted the graph measures and used coefficient of variation (CoV) and the Mann-Whitney U test to evaluate different methods' effectiveness in removing site effects on the matrices and the derived graph measures.
no code implementations • 6 Nov 2023 • Chenyu Gao, Michael E. Kim, Ho Hin Lee, Qi Yang, Nazirah Mohd Khairi, Praitayini Kanakaraj, Nancy R. Newlin, Derek B. Archer, Angela L. Jefferson, Warren D. Taylor, Brian D. Boyd, Lori L. Beason-Held, Susan M. Resnick, The BIOCARD Study Team, Yuankai Huo, Katherine D. Van Schaik, Kurt G. Schilling, Daniel Moyer, Ivana Išgum, Bennett A. Landman
We find that the ResNet model captures subtler, non-macrostructural features for brain age prediction.
no code implementations • 18 Nov 2020 • Cailey I. Kerley, Leon Y. Cai, Chang Yu, Logan M. Crawford, Jason M. Elenberger, Eden S. Singh, Kurt G. Schilling, Katherine S. Aboud, Bennett A. Landman, Tonia S. Rex
We then applied independent component analysis (ICA) both to each PCA space individually and together in a joint ICA approach.
no code implementations • 20 Feb 2020 • Vishwesh Nath, Sudhir K. Pathak, Kurt G. Schilling, Walt Schneider, Bennett A. Landman
Herein, we explore the possibility of using deep learning on single shell data (using the b=1000 s/mm2 from the Human Connectome Project (HCP)) to estimate the information content captured by 8th order MT-CSD using the full three shell data (b=1000, 2000, and 3000 s/mm2 from HCP).
no code implementations • 6 Dec 2019 • Cailey I. Kerley, Kurt G. Schilling, Justin Blaber, Beth Miller, Allen Newton, Adam W. Anderson, Bennett A. Landman, Tonia S. Rex
Veterans with mild traumatic brain injury (mTBI) have reported auditory and visual dysfunction that persists beyond the acute incident.
no code implementations • 13 Nov 2019 • Vishwesh Nath, Kurt G. Schilling, Colin B. Hansen, Prasanna Parvathaneni, Allison E. Hainline, Camilo Bermudez, Andrew J. Plassard, Vaibhav Janve, Yurui Gao, Justin A. Blaber, Iwona Stępniewska, Adam W. Anderson, Bennett A. Landman
Confocal histology provides an opportunity to establish intra-voxel fiber orientation distributions that can be used to quantitatively assess the biological relevance of diffusion weighted MRI models, e. g., constrained spherical deconvolution (CSD).
no code implementations • 15 Jul 2019 • Vishwesh Nath, Ilwoo Lyu, Kurt G. Schilling, Prasanna Parvathaneni, Colin B. Hansen, Yucheng Tang, Yuankai Huo, Vaibhav A. Janve, Yurui Gao, Iwona Stepniewska, Adam W. Anderson, Bennett A. Landman
In the in-vivo human data, Deep SHORE was more consistent across scanners with 0. 63 relative to other multi-shell methods 0. 39, 0. 52 and 0. 57 in terms of ACC.
no code implementations • 9 Oct 2018 • Vishwesh Nath, Prasanna Parvathaneni, Colin B. Hansen, Allison E. Hainline, Camilo Bermudez, Samuel Remedios, Justin A. Blaber, Kurt G. Schilling, Ilwoo Lyu, Vaibhav Janve, Yurui Gao, Iwona Stepniewska, Baxter P. Rogers, Allen T. Newton, L. Taylor Davis, Jeff Luci, Adam W. Anderson, Bennett A. Landman
Herein, we propose a data-driven tech-nique using a neural network design which exploits two categories of data.