Search Results for author: Melissa A Haendel

Found 5 papers, 1 papers with code

MapperGPT: Large Language Models for Linking and Mapping Entities

1 code implementation5 Oct 2023 Nicolas Matentzoglu, J. Harry Caufield, Harshad B. Hegde, Justin T. Reese, Sierra Moxon, HyeongSik Kim, Nomi L. Harris, Melissa A Haendel, Christopher J. Mungall

Here we present MapperGPT, an approach that uses LLMs to review and refine mapping relationships as a post-processing step, in concert with existing high-recall methods that are based on lexical and structural heuristics.

Anatomy Data Integration +1

An evaluation of GPT models for phenotype concept recognition

no code implementations29 Sep 2023 Tudor Groza, Harry Caufield, Dylan Gration, Gareth Baynam, Melissa A Haendel, Peter N Robinson, Christopher J Mungall, Justin T Reese

Objective: Clinical deep phenotyping and phenotype annotation play a critical role in both the diagnosis of patients with rare disorders as well as in building computationally-tractable knowledge in the rare disorders field.

Few-Shot Learning Specificity

Analyzing historical diagnosis code data from NIH N3C and RECOVER Programs using deep learning to determine risk factors for Long Covid

no code implementations5 Oct 2022 Saurav Sengupta, Johanna Loomba, Suchetha Sharma, Donald E. Brown, Lorna Thorpe, Melissa A Haendel, Christopher G Chute, Stephanie Hong

Using our deep learning approach, we are able to predict if a patient is suffering from Long COVID from a temporally ordered list of diagnosis codes up to 45 days post the first COVID positive test or diagnosis for each patient, with an accuracy of 70. 48\%.

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