1 code implementation • 3 Dec 2023 • Saurav Sengupta, Donald E. Brown
Deep learning for histopathology has been successfully used for disease classification, image segmentation and more.
Caption Generation Histopathological Image Classification +4
1 code implementation • 10 Nov 2023 • Saurav Sengupta, Donald E. Brown
In this work, we show that using an existing pre-trained Vision Transformer in a two-step process of first using it to encode 4096x4096 sized patches of the Whole Slide Image (WSI) and then using it as the encoder and an LSTM decoder for report generation, we can build a fairly performant and portable report generation mechanism that takes into account the whole of the high resolution image, instead of just the patches.
no code implementations • 5 Oct 2022 • Saurav Sengupta, Johanna Loomba, Suchetha Sharma, Donald E. Brown, Lorna Thorpe, Melissa A Haendel, Christopher G Chute, Stephanie Hong
Using our deep learning approach, we are able to predict if a patient is suffering from Long COVID from a temporally ordered list of diagnosis codes up to 45 days post the first COVID positive test or diagnosis for each patient, with an accuracy of 70. 48\%.
no code implementations • 8 Aug 2019 • Aman Shrivastava, Karan Kant, Saurav Sengupta, Sung-Jun Kang, Marium Khan, Asad Ali, Sean R. Moore, Beatrice C. Amadi, Paul Kelly, Donald E. Brown, Sana Syed
Physicians use biopsies to distinguish between different but histologically similar enteropathies.