no code implementations • 4 Jan 2024 • Parisa Boodaghi Malidarreh, Biraaj Rout, Mohammad Sadegh Nasr, Priyanshi Borad, Jillur Rahman Saurav, Jai Prakash Veerla, Kelli Fenelon, Theodora Koromila, Jacob M. Luber
In this paper, we introduce a pipeline based on Random Forest Regression to predict the future distribution of cells that are expressed by the Sog-D gene (active cells) in both the Anterior to posterior (AP) and the Dorsal to Ventral (DV) axis of the Drosophila in embryogenesis process.
no code implementations • 19 Dec 2023 • Neel R Vora, Amir Hajighasemi, Cody T. Reynolds, Amirmohammad Radmehr, Mohamed Mohamed, Jillur Rahman Saurav, Abdul Aziz, Jai Prakash Veerla, Mohammad S Nasr, Hayden Lotspeich, Partha Sai Guttikonda, Thuong Pham, Aarti Darji, Parisa Boodaghi Malidarreh, Helen H Shang, Jay Harvey, Kan Ding, Phuc Nguyen, Jacob M Luber
Head-based signals such as EEG, EMG, EOG, and ECG collected by wearable systems will play a pivotal role in clinical diagnosis, monitoring, and treatment of important brain disorder diseases.
2 code implementations • 29 Jun 2023 • Helen H. Shang, Mohammad Sadegh Nasr, Jai Prakash Veerla, Parisa Boodaghi Malidarreh, MD Jillur Rahman Saurav, Amir Hajighasemi, Manfred Huber, Chace Moleta, Jitin Makker, Jacob M. Luber
The search and retrieval of digital histopathology slides is an important task that has yet to be solved.
no code implementations • 29 Jun 2023 • Michael Robben, Amir Hajighasemi, Mohammad Sadegh Nasr, Jai Prakesh Veerla, Anne M. Alsup, Biraaj Rout, Helen H. Shang, Kelli Fowlds, Parisa Boodaghi Malidarreh, Paul Koomey, MD Jillur Rahman Saurav, Jacob M. Luber
Artificial intelligence represents a new frontier in human medicine that could save more lives and reduce the costs, thereby increasing accessibility.
no code implementations • 11 Jun 2023 • Amir Hajighasemi, MD Jillur Rahman Saurav, Mohammad S Nasr, Jai Prakash Veerla, Aarti Darji, Parisa Boodaghi Malidarreh, Michael Robben, Helen H Shang, Jacob M Luber
We present an approach for multimodal pathology image search, using dynamic time warping (DTW) on Variational Autoencoder (VAE) latent space that is fed into a ranked choice voting scheme to retrieve multiplexed immunofluorescent imaging (mIF) that is most similar to a query H&E slide.
no code implementations • 6 May 2023 • Helen Shang, Yi Ding, Vidhya Venkateswaran, Kristin Boulier, Nikhita Kathuria-Prakash, Parisa Boodaghi Malidarreh, Jacob M. Luber, Bogdan Pasaniuc
We found that the PRS313 achieved overlapping Areas under the ROC Curve (AUCs) in females of Lantix (AUC, 0. 68; 95 CI, 0. 65-0. 71) and European ancestry (AUC, 0. 70; 95 CI, 0. 69-0. 71) but lower AUCs for the AFR and EAA populations (AFR: AUC, 0. 61; 95 CI, 0. 56-0. 65; EAA: AUC, 0. 64; 95 CI, 0. 60-0. 680).
1 code implementation • 23 Mar 2023 • Mohammad Sadegh Nasr, Amir Hajighasemi, Paul Koomey, Parisa Boodaghi Malidarreh, Michael Robben, Jillur Rahman Saurav, Helen H. Shang, Manfred Huber, Jacob M. Luber
We generate and visualize embeddings from the compressed latent space and demonstrate how they are useful for clinical interpretation of data, and how in the future such latent embeddings can be used to accelerate search of clinical imaging data.
1 code implementation • 15 Oct 2021 • Abualkasim Bakeer, Ihab S. Mohamed, Parisa Boodaghi Malidarreh, Intissar Hattabi, Lantao Liu
The case study herein is based on a four-level three-cell flying capacitor inverter.