Search Results for author: Allen Tannenbaum

Found 12 papers, 1 papers with code

Optimal Transport for Kernel Gaussian Mixture Models

no code implementations28 Oct 2023 Jung Hun Oh, Rena Elkin, Anish Kumar Simhal, Jiening Zhu, Joseph O Deasy, Allen Tannenbaum

The Wasserstein distance from optimal mass transport (OMT) is a powerful mathematical tool with numerous applications that provides a natural measure of the distance between two probability distributions.

Data Assimilation for Sign-indefinite Priors: A generalization of Sinkhorn's algorithm

no code implementations22 Aug 2023 Anqi Dong, Tryphon T. Georgiou, Allen Tannenbaum

The resulting algorithm generalizes the Sinkhorn algorithm in that it amounts to iterative scaling of the entries of the array along different coordinate directions.

Promotion/Inhibition Effects in Networks: A Model with Negative Probabilities

no code implementations15 Jul 2023 Anqi Dong, Tryphon T. Georgiou, Allen Tannenbaum

Herein we address the inverse problem to determine network edge-weights based on a sign-indefinite adjacency and expression levels at the nodes.

Wasserstein Image Local Analysis: Histogram of Orientations, Smoothing and Edge Detection

no code implementations11 May 2022 Jiening Zhu, Harini Veeraraghavan, Larry Norton, Joseph O. Deasy, Allen Tannenbaum

We approach the directionality problem from a novel perspective by the use of the optimal transport map of a local image patch to a uni-color patch of its mean.

Edge Detection

Optimal transport for vector Gaussian mixture models

no code implementations16 Dec 2020 Jiening Zhu, Kaiming Xu, Allen Tannenbaum

Vector-valued Gaussian mixtures form an important special subset of vector-valued distributions.

Computational Efficiency

Multimarginal Wasserstein Barycenter for Stain Normalization and Augmentation

no code implementations25 Jun 2020 Saad Nadeem, Travis Hollmann, Allen Tannenbaum

Variations in hematoxylin and eosin (H&E) stained images (due to clinical lab protocols, scanners, etc) directly impact the quality and accuracy of clinical diagnosis, and hence it is important to control for these variations for a reliable diagnosis.

Kernel Wasserstein Distance

no code implementations22 May 2019 Jung Hun Oh, Maryam Pouryahya, Aditi Iyer, Aditya P. Apte, Allen Tannenbaum, Joseph O. Deasy

The Wasserstein distance is a powerful metric based on the theory of optimal transport.

Clustering

Reproducible and Interpretable Spiculation Quantification for Lung Cancer Screening

1 code implementation24 Aug 2018 Wookjin Choi, Saad Nadeem, Sadegh Riyahi, Joseph O. Deasy, Allen Tannenbaum, Wei Lu

The spiculation quantification measures was then applied to the radiomics framework for pathological malignancy prediction with reproducible semi-automatic segmentation of nodule.

GlymphVIS: Visualizing Glymphatic Transport Pathways Using Regularized Optimal Transport

no code implementations24 Aug 2018 Rena Elkin, Saad Nadeem, Eldad Haber, Klara Steklova, Hedok Lee, Helene Benveniste, Allen Tannenbaum

The glymphatic system (GS) is a transit passage that facilitates brain metabolic waste removal and its dysfunction has been associated with neurodegenerative diseases such as Alzheimer's disease.

Affine Differential Invariants for Invariant Feature Point Detection

no code implementations5 Mar 2018 Stanley L. Tuznik, Peter J. Olver, Allen Tannenbaum

Image feature points are detected as pixels which locally maximize a detector function, two commonly used examples of which are the (Euclidean) image gradient and the Harris-Stephens corner detector.

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