1 code implementation • 24 Feb 2023 • Nataša Tagasovska, Firat Ozdemir, Axel Brando
Despite the major progress of deep models as learning machines, uncertainty estimation remains a major challenge.
1 code implementation • 17 Jun 2022 • Firat Ozdemir, Berkan Lafci, Xosé Luís Deán-Ben, Daniel Razansky, Fernando Perez-Cruz
However, no standardized datasets generated with different types of experimental set-up and associated processing methods are available to facilitate advances in broader applications of OA in clinical settings.
1 code implementation • 28 Jan 2022 • Carlo Albert, Simone Ulzega, Firat Ozdemir, Fernando Perez-Cruz, Antonietta Mira
For stochastic models with intractable likelihood functions, approximate Bayesian computation offers a way of approximating the true posterior through repeated comparisons of observations with simulated model outputs in terms of a small set of summary statistics.
1 code implementation • 27 Sep 2021 • Michael Stalder, Firat Ozdemir, Artur Safin, Jonas Sukys, Damien Bouffard, Fernando Perez-Cruz
Nowadays physical models are developed to estimate lake dynamics; however, computations needed for accurate estimation of lake surface temperature can get prohibitively expensive.
no code implementations • 7 Jan 2020 • Firat Ozdemir, Christine Tanner, Orcun Goksel
Bone surface delineation in ultrasound is of interest due to its potential in diagnosis, surgical planning, and post-operative follow-up in orthopedics, as well as the potential of using bones as anatomical landmarks in surgical navigation.
no code implementations • 22 Dec 2019 • Firat Ozdemir, Zixuan Peng, Philipp Fuernstahl, Christine Tanner, Orcun Goksel
In an active learning framework of selecting informed samples for manual labeling, expert clinician time for manual annotation can be optimally utilized, enabling the establishment of large labeled datasets for machine learning.
1 code implementation • 12 Nov 2018 • Firat Ozdemir, Orcun Goksel
We propose a class-incremental segmentation framework for extending a deep network trained for some anatomical structure to yet another structure using a small incremental annotation set.
no code implementations • 19 Jul 2018 • Christine Tanner, Firat Ozdemir, Romy Profanter, Valeriy Vishnevsky, Ender Konukoglu, Orcun Goksel
Performance for the abdominal region was similar to that of CT-MRI NMI registration (77. 4 vs. 78. 8%) when using 3D synthesizing MRIs (12 slices) and medium sized receptive fields for the discriminator.
no code implementations • 18 Jul 2018 • Firat Ozdemir, Zixuan Peng, Christine Tanner, Philipp Fuernstahl, Orcun Goksel
Segmentation is essential for medical image analysis tasks such as intervention planning, therapy guidance, diagnosis, treatment decisions.
no code implementations • 1 Jun 2018 • Firat Ozdemir, Philipp Fuernstahl, Orcun Goksel
Deep learning has been widely accepted as a promising solution for medical image segmentation, given a sufficiently large representative dataset of images with corresponding annotations.